KEGG   Candidatus Kinetoplastibacterium desouzaii: CDSE_0525
Entry
CDSE_0525         CDS       T02465                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
kde  Candidatus Kinetoplastibacterium desouzaii
Pathway
kde03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kde00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CDSE_0525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kde03021]
    CDSE_0525
   03400 DNA repair and recombination proteins [BR:kde03400]
    CDSE_0525
Enzymes [BR:kde01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CDSE_0525
Transcription machinery [BR:kde03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CDSE_0525
DNA repair and recombination proteins [BR:kde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CDSE_0525
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGF46835
UniProt: M1M3L4
Position
complement(317000..317203)
AA seq 67 aa
MARITVEDCLKNINNRFDLTLAAAYRARELAQGHMPKIDSKDKPTVLALREIGKGLSGIE
MLLKVPG
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcacgcattacagtagaagattgtttaaagaatattaataatagatttgatttaact
ttagcagcggcatatcgtgcaagagaacttgcacagggtcatatgcctaaaattgattct
aaagataaaccaactgtactagctttacgtgaaataggcaaaggactttctggaattgaa
atgcttcttaaagtacctggataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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