KEGG   Kribbella flavida: Kfla_3205
Entry
Kfla_3205         CDS       T01155                                 
Name
(GenBank) beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
kfl  Kribbella flavida
Pathway
kfl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kfl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kfla_3205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kfl03019]
    Kfla_3205
Messenger RNA biogenesis [BR:kfl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Kfla_3205
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 DUF1732
Other DBs
NCBI-ProteinID: ADB32268
UniProt: D2Q4F4
Position
complement(3422074..3423759)
AA seq 561 aa
MSHPHPDLGQPPRLPDDALRVVALGGLGEIGRNMTVFEHRGKLLVVDCGVLFPEEHQPGV
DVILPDFGWIRDRLDKIEAIVLTHGHEDHIGGVPYLLKERGDIPVVGSKLTLAFITSKLK
EHRLKPVTVEVKEGDRQQLGPFECEFLAVNHSIPDGLAVAIRTRAGLVLHTGDFKMDQFP
LDRRLTDLRGFARLGEEGVDLFMTDSTNADVPGFTTAEKDLGPAIDQVFRTAPGRIIVSS
FASHVHRIQQVLDAAKAGGRKVAFVGRSMVRNMGIARDLGYLNVPKGLIVDLKELEQLPD
RKVTLVCTGSQGEPMAALSRMANRDHMIRIGEGDTVLMASSLIPGNENAIYAVINGLIRW
GANVVHKGNAKVHVSGHASAGELVYCYNLVKPRNVLPVHGEFRHLKANAALATSTGVPAE
RVIIAEDGVVVDLHKGRARITGKVEAGYVYVDAMTVGGVTEANLKDRRTLGEEGVVTVVL
LVDANTGKLAEPPDFLARGFVHDDTTFKPVIPVIEEALAKAAAEAIGDASQLEQLVGRAV
GNWTYRHWRRRPVVIPVVIDA
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagtcatccgcatcccgatctcggtcaaccgccacgcctgcccgacgacgccctgcgc
gtggtcgccctgggcgggctcggcgagatcggccggaacatgaccgtgttcgagcaccgc
ggcaagttgctggtggtcgactgcggcgtgctgttccccgaggagcaccagcccggcgtc
gacgtgatcctgcccgacttcggctggatccgggaccggctggacaagatcgaggcgatc
gtgctgacccacgggcacgaggaccacatcggcggcgtgccgtacctgctcaaggagcgc
ggcgacatcccggtggtcggctcgaagctgaccttggcgttcatcacctccaagctcaag
gagcaccggctcaagccggtcaccgtcgaggtcaaggagggcgaccggcagcagctcggc
ccgttcgagtgcgagttcctcgcggtcaaccactcgatcccggacggcctcgcggtcgcg
atccggacccgggccggcctggtcctgcacaccggcgacttcaagatggaccagttcccg
ctggaccgccggctgaccgacctgcgcggtttcgcccggctcggcgaggagggcgtcgac
ctgttcatgacggactccacgaacgccgacgtgccgggcttcaccaccgccgagaaggac
ctcggcccggcgatcgaccaggtcttccggaccgcgccgggccggatcatcgtgtccagc
ttcgccagccacgtgcaccggatccagcaggtgctggacgccgccaaggccggcggccgc
aaggtggcgttcgtcggccgctcgatggtgcgcaacatgggcatcgcccgcgacctgggc
tacctgaacgtgccgaagggcctgatcgtcgacctcaaggagctggagcagctgccggac
cgcaaggtcacgctggtctgcaccgggtcgcagggtgagccgatggccgcgctgtcgcgg
atggccaaccgggaccacatgatccggatcggcgagggcgacaccgtgctgatggccagc
tcgctgatccccggcaacgagaacgcgatctacgcggtgatcaacggcctgatccgctgg
ggcgcgaacgtcgtgcacaagggcaacgcgaaggtgcacgtgtccggccacgccagcgcc
ggcgagctcgtctactgctacaacctggtcaagccgcgcaacgtgctgcccgtgcacggc
gagttccggcacctgaaggcgaacgcggcgctggccaccagtaccggcgtaccggccgag
cgggtgatcatcgccgaggacggcgtggtggtcgacctgcacaagggccgggcccggatc
accggcaaggtcgaggcgggctacgtgtacgtcgacgcgatgaccgtcggcggggtgacc
gaggccaacctcaaggaccgccgcacgctcggcgaggagggggtcgtcacggtcgtgctg
ctcgtcgacgccaacaccggcaagctggccgagccgccggacttcctggcccgtggtttc
gtgcacgacgacaccacgttcaagccggtcatcccggtgatcgaggaggcgctggccaag
gccgccgccgaggcgatcggcgacgcgagccagctcgagcagctggtcggccgcgccgtc
ggcaactggacctaccgccactggcgccgccgcccggtcgtcatccccgtcgtcatcgac
gcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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