KEGG   Kribbella flavida: Kfla_6625
Entry
Kfla_6625         CDS       T01155                                 
Name
(GenBank) protein of unknown function UPF0027
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
kfl  Kribbella flavida
Brite
KEGG Orthology (KO) [BR:kfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kfl03016]
    Kfla_6625
Enzymes [BR:kfl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     Kfla_6625
Transfer RNA biogenesis [BR:kfl03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    Kfla_6625
 Prokaryotic type
   tRNA splicing ligases
    Kfla_6625
SSDB
Motif
Pfam: RtcB Hexapep
Other DBs
NCBI-ProteinID: ADB35617
UniProt: D2PZQ1
Position
7087452..7088645
AA seq 397 aa
MNVQYPVPLSGAKSSTLMWAQEHEVGAQALQQLRNIAALPWVHGVRVMPDVHLGKGATVG
SVIAMKQAVSPAAVGVDIGCGMEGVLTSLTAADLPDDLSKIRSRIEAAVPVGFRAHEYPV
SVRKLGLDRGWDTFWGSFSSLHDGVQDREKKAQQQMGSLGGGNHFIEVCLDDEDRVWLML
HSGSRNIGKELAERHMRIAKSLPHNADLPDRDLAVFLAGTREMDAYRRDLTWAQEYASRN
RAVMLALVMQAVRESFEQPVRFEKPISCHHNYVAEETIDGLDLLVTRKGAIRAGLGDLGL
IPGSMGTGSYVVRGLGSERSFYSASHGAGRRMSRNEAKRRYTVGDLIEQTAGVESRKDAG
VLDELPAAYKDIESVIAAQSDLVEVVAHLKQVICVKG
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaacgttcagtacccggtcccgctgagtggggcgaagagctccactctgatgtgggcc
caggagcacgaggtcggcgcccaggctctgcagcaactgcgcaacatcgccgcgctgccg
tgggtgcacggcgtccgggtgatgccggacgtccacctcggcaagggcgcgacggtcggc
tcggtgattgcgatgaagcaggcggtgtcgccggccgcggtcggggtcgacatcggctgc
ggcatggagggcgtgctgacgtcgctgacggcggccgacctgcccgacgacctgtcgaag
atccgcagccggatcgaggccgccgtaccggtcgggttccgggcgcacgagtacccggtg
agtgtccgcaagctggggctcgaccggggctgggacaccttctgggggtcgttctccagc
ctgcacgacggggtgcaggaccgggagaagaaggcgcagcagcagatgggctcgctcggt
ggcggcaaccacttcatcgaggtctgcctggacgacgaggaccgggtctggctgatgctg
cactccggcagccggaacatcggcaaggagctggccgagcggcacatgcggatcgcgaag
tcgctgccgcacaacgccgacctgccggaccgcgacctggccgtcttcctggcgggcacg
cgcgagatggacgcctaccggcgtgacctgacctgggcgcaggagtacgcgtcgcgcaac
cgcgcggtgatgctcgcgctggtgatgcaggcggtccgggagtcgttcgagcagccggtc
cggttcgagaagccgatctcgtgccaccacaactacgtggcggaggagacgatcgacggg
ctcgacctgctcgtcacccgcaagggcgcgatccgggccgggctcggtgacctgggcctg
atcccggggtcgatggggaccggctcgtacgtcgtgcgcgggctcggctcggagcggtcg
ttctactcggcctcgcacggggcaggccggcggatgagccgcaacgaggcgaagcgccgg
tacacggtcggcgacctgatcgagcagacggccggggtcgagtcgcgcaaggacgccggg
gtgctcgacgagctgccggcggcgtacaaggacatcgagtcggtgatcgcggcgcagtcc
gacctggtcgaggtcgtcgcgcatctcaagcaggtcatctgcgtcaagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system