KEGG   Candidatus Kinetoplastibacterium galatii: ST1E_0612
Entry
ST1E_0612         CDS       T02466                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease recJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kga  Candidatus Kinetoplastibacterium galatii
Pathway
kga03410  Base excision repair
kga03430  Mismatch repair
kga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ST1E_0612
   03430 Mismatch repair
    ST1E_0612
   03440 Homologous recombination
    ST1E_0612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kga03400]
    ST1E_0612
DNA repair and recombination proteins [BR:kga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ST1E_0612
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ST1E_0612
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ST1E_0612
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: AGF49012
UniProt: M1LTY0
Position
complement(334276..335985)
AA seq 569 aa
MAILPRIIIRSTEKEPISILESFGIHPLLAKLWTSRGINNINQIKYDWISLIPPNYLNQI
DNAARHLTDAITKNKNILIVADYDCDGATACAVGIRAMRAMKANVDFIVPNRFKNGYGLS
TDIIEQILLNRKYKPDIILTVDNGISSIDGIEYANENNIQVIVTDHHLPGTRLPNALSIV
NPNQPNCNFPSKNLSGVGVIFYLMIALRAEMRRRNIYHNNTGPKLNELVDLVALGTIADL
VKLDANNRLMVTQGLNRIRSGYTKPGIKALFKIANRKIDNADSCDLGFYIAPRLNAAGRL
SDMRLGILCLITDEYDEAIRIATELDSINKCRRSIENKMNEEALLDITNNEFEEKNTICI
YDEKWHSGVVGLVASKLKEKFWKPTIVFADSGNNEIRGSARSIIDLNIRDILDTIANNHN
NLIKQFGGHAMAAGLTLNSNNYTAFKEIFEDTVKSITNNSKMIPTIETDGSLEIEYANLE
ISRLLRMQVWGSGFPSPIFIDTFKVISQKTIKNAHKKLIIKREGTEFDAIWFNHTNNLPN
NIKVVYRVDENTWNGKNYLQLLIEYIYPL
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcaatattacctagaataataataagatcaacagaaaaagagccaattagcatttta
gaaagctttggaatacatcctttgttagcaaagttatggacatccagaggaattaataat
ataaatcaaattaagtatgattggatatcactgataccaccaaattatttaaatcaaata
gataatgccgctagacatttaactgatgccattacaaaaaataaaaatatattaatagta
gctgattatgattgtgatggagcaacagcatgtgctgtaggaatcagagcaatgcgagca
atgaaggcgaatgttgattttatagtccctaatcgatttaaaaatggctatggcctatct
acagacattatcgaacaaatattattaaatagaaaatataaaccagacataattctcaca
gtagataatggaatatcgagtattgatggaatagaatatgcaaacgagaataatattcag
gttatagttacagatcatcaccttccaggaaccaggcttcctaatgcattatccatagtt
aatcctaatcaacctaactgtaatttcccatctaaaaatttatcaggtgtaggtgtaata
ttttatctaatgatagcactcagagcggaaatgcgtagacgaaatatatatcacaataat
acaggacctaagttaaatgaattagtcgacttagtagcattaggaaccattgcagactta
gtaaaactagatgctaataatcgtttaatggtaacacaaggattaaatagaataaggagc
ggttatactaaaccaggcataaaggcattatttaaaatagcaaatagaaaaatagataat
gctgacagttgtgatttaggattctatatagcaccacgtcttaatgcagctggacgttta
tctgatatgagattaggaatattgtgcttaataacagatgaatacgatgaagcaataaga
atagcaacagaactagatagtattaataaatgtcgtagatctatagaaaataaaatgaac
gaagaggcattattagacataacaaataatgagttcgaagaaaaaaacacaatatgtatt
tatgatgaaaaatggcatagtggtgtagttggcttggttgcttcaaaattaaaagaaaaa
ttttggaagccaacaatagtatttgcagactctgggaataatgaaataagaggatccgca
agatctataatagatttaaacataagagatatattagatacaatagctaataaccataat
aatttaataaaacaatttggcggacacgcaatggctgcagggttaacattaaatagtaat
aactacactgcatttaaagaaatatttgaagatacagtaaaatcaataactaataacagt
aaaatgattcctacaattgaaacagatggctctcttgaaattgaatatgcgaatttggaa
atttctcgtctattaagaatgcaagtatggggatcaggttttccttcaccgatatttatt
gatacttttaaagtgatttcacaaaaaacaattaaaaacgctcacaaaaaattaataata
aaaagagagggaacagaatttgatgctatctggtttaatcatacaaataatttgccaaac
aatataaaagtggtatacagagttgatgaaaatacatggaatggcaaaaattatttgcaa
ttattaatcgaatacatatatccattatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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