KEGG   Kangiella geojedonensis: TQ33_1943
Entry
TQ33_1943         CDS       T03889                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
kge  Kangiella geojedonensis
Pathway
kge03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kge00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TQ33_1943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kge03021]
    TQ33_1943
   03400 DNA repair and recombination proteins [BR:kge03400]
    TQ33_1943
Enzymes [BR:kge01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TQ33_1943
Transcription machinery [BR:kge03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TQ33_1943
DNA repair and recombination proteins [BR:kge03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TQ33_1943
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AKE52877
UniProt: A0A0F6TS95
Position
complement(2142468..2146535)
AA seq 1355 aa
MAYSYTEKKRIRKDFGRRSKILDVPYLLAIQLDSYREFLEPKGDNDSGLDSAFKSIFPIE
SYSGNAALEYVSYSMGEPVFNVKECQIRGITYSAPLRVKIRLVIYDKDSKTKKVKDIREQ
EVFMGELPLMTGNGTFVINGTERVIVSQLHRSPGVFFDSDRGKTHSSGKLLYQARVIPYR
GSWLDFEFDPKDMLYVRIDRRRKLPASIILRALEYSTQDMLDMFFERNNFYITKDGGIQL
ELVPSRLRGETATFDIKAKSKVVVEEGRRITPRHIQQLEKAGTKKLDVPTEYILGRALAT
DIIDKDSGEVIAEANAEITEELLESLIEAKVTDVPTLYTNDLDHGPYMSDTLRIDPSKSA
LEAKVEIYRMMRPGEPPTQEAAEGLFENLFFNQERYDLSRVGRMKFNRRVGRDEIEGEGT
LSNQDIIDVMKTLIDIRNGNGTVDDIDHLGNRRIRCVGEMAENQFRVGLVRVERAVKERL
SQAESENLMPQDLINAKPVSAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLT
RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLACYARTNEYGFLETPYRRVKDGKP
TADVDYLSAIDEGKFIIAQANANLNKDGTFSDELVPSRNMGEFMLATPDQVEYMDVSPQQ
IVSVAASMIPFLEHDDANRALMGSNMQRQAVPTLRAEKPLVGTGMERAVAVDSGVVVAAK
RGGVVDQVDASRVVIRVHEDEVGDNDSGVDIYNFTKYTRSNQNTCINQRPIVKQGDIIER
GDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILISENVVQEDRFTSIHIQELTCI
SRDTKLGPEEITSDIPNVGESALSKLDESGIVYIGAEVKPGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDTSLRVGTSTHGTVIDVQVFTRDGVEKDARAKEIENSEVARAKKD
INDEFRILAESIYQRARNLITGCVAEKGPNKLKKGSKVTVDYLDELEPKQYLDIQLRVEE
KQQALENLANYLAEQRKEYDKKFDIQKIKITQGDDLQPGVQKIVKVYLAVKRRIQPGDKM
AGRHGNKGVISNIVPVEDMPYDDQGVPVDIVLNPLGVPSRMNIGQVLETHLGWAAKGVGE
KIGELLDTGKAPKTVKTFLNKVYNHRDDKTVDLSEMTDDEVMNMAGNLRNGVPMATPVFD
GAAETDIHAMFDLAELPKSGQTWLYDGRTGDKFERPVTVGYMYMLKLNHLVDDKMHARST
GSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTRMYKNI
VDGNHQMEPGMPESFNVLTKEIKSLAINIELEHDE
NT seq 4068 nt   +upstreamnt  +downstreamnt
atggcatattcttacactgagaaaaaacgaatccgtaaggattttggtcgacgttcaaag
attctcgatgtgccttatctgttggcaattcaattggattcataccgtgaattccttgag
ccaaaaggcgataatgattctggtttggactctgcgttcaaatcaatcttccctatcgaa
agctattcaggtaatgcagctcttgagtacgtaagttactcaatgggagagccagtattc
aacgttaaggaatgtcagatccgtggcattacttactctgcgccattgcgcgtaaaaatt
cgcttagttatctatgataaagattctaagacgaaaaaagttaaagatatccgtgaacaa
gaagtgttcatgggtgagttacctttgatgacaggaaacggtacttttgttatcaacggt
actgagcgtgttatcgtttctcagttacaccgtagcccaggtgttttcttcgactctgat
cgtggtaaaacgcatagctccggtaaactattgtatcaagctcgtgtgattccttaccgt
ggttcatggttggatttcgagttcgatccaaaagatatgctatacgtgcgaatcgaccgt
cgccgtaaattaccagcatcaattatcttgcgagcacttgagtattctacgcaagacatg
ctggatatgttcttcgagcgtaacaacttctacatcactaaagatggtggcatccagctt
gagctagtgccgtctcgtttacgtggtgaaactgcaacctttgatattaaagcgaagagc
aaagttgtggtggaagaaggccgtcgtattacgcctcgtcacattcaacagttagagaaa
gctggtacgaaaaaactagatgttccgactgagtacatcttaggccgtgcccttgctact
gatattattgataaagattctggtgaagtaattgctgaagctaacgcagaaattactgag
gaattattagagtcattaattgaagcaaaagttacggatgttcctacactttatacgaat
gacttggaccatggcccttacatgtcagatacattacgtattgacccaagtaagagtgcg
cttgaagctaaagttgaaatctaccgcatgatgcgtcctggtgaaccaccaacgcaagaa
gcggcagaaggtttgtttgaaaacctattcttcaatcaagaacgttatgacttatctcgc
gttggacgtatgaagttcaaccgtcgtgttggtcgtgacgagattgaaggtgaaggtacg
ctatctaaccaagatatcattgatgtcatgaaaacattgatcgatattcgtaatggtaat
ggcacagttgatgatattgaccacttaggtaaccgtcggattcgttgcgtaggtgaaatg
gctgagaatcaattccgtgttggtttggtacgtgttgagcgtgcggtaaaagaacgtctt
tcacaagctgaaagcgaaaacttaatgccacaagatttgatcaacgctaagcctgtatca
gcagcggttaaagagttctttggctcaagtcagttatcacagttcatggaccagaataac
ccgttgtcagaaattacgcacaagcgtcgtgtttctgcattaggccctggtggtttgacg
cgtgagcgtgcaggctttgaggttcgagacgtacacccaactcactatggtcgtgtatgt
ccgattgagaccccagaaggtccaaacattggtttgatcaactcgttagcgtgttatgca
cgtactaacgaatatggtttcttagagacaccttaccgtcgagttaaagatggtaagcca
acggcagatgttgattacctatcagcaatcgatgaaggcaagttcatcattgcacaggca
aacgcaaacttgaataaagacggtactttcagtgatgaattagtgccttcacgtaacatg
ggcgagttcatgttagcgacacctgatcaagttgagtatatggatgtctcgccacagcag
atcgtatcggttgcggcaagtatgattccattccttgagcacgatgatgcgaaccgtgca
ttgatgggctccaacatgcaacgtcaggctgttccaacattacgtgctgaaaagccgtta
gttggtaccggtatggagcgtgctgttgccgtggactcaggtgtagttgtagctgctaag
cgtggtggtgttgtagaccaagttgatgcaagccgtgtggttatccgtgttcatgaagat
gaagtgggtgataacgattctggcgtagatatttacaacttcacaaaatacacgcgttcg
aaccagaacacttgtattaaccaacgacctatcgttaaacaaggcgacatcattgagcgt
ggcgatgtattggctgacggcccttcaactgacttaggtgagttggcgttaggtcaaaac
atgcgtgtcgcattcatgccttggaatggttacaactttgaggattcgatccttatttct
gaaaacgtggtacaagaagatcgcttcactagtatccacattcaggagctaacctgtatt
tctcgtgacactaagttaggccctgaagaaattacttcagatattcctaacgtgggcgaa
agtgcactaagcaaacttgacgagtcaggtattgtttatatcggcgcagaagtgaagccg
ggtgacatcttagtcggtaaggtaacgcctaaaggtgaaactcaattgactccggaagaa
aagcttctgagagcaatcttcggtgagaaggcttctgatgttaaagatacatctttacgc
gttggcacttcgacgcacggaacggtaattgacgtacaagtctttactcgtgatggtgtt
gagaaagatgctcgtgctaaagaaattgaaaacagtgaagtggcgcgtgctaagaaagac
attaatgatgagtttcgtattttggcggaaagcatctatcagcgtgctcgcaacttaatt
acaggttgtgttgctgagaaaggccctaacaagttgaaaaaaggcagtaaagtaactgtt
gattacttagacgaattagagccaaagcaatacttagacattcagttgcgtgttgaagaa
aaacaacaggcgcttgagaatctagcgaactacttagctgaacaacgcaaagagtacgac
aagaaatttgatatccagaaaataaaaatcactcaaggtgatgatttacaacctggtgta
caaaaaattgttaaggtttacctagcggttaaacgtcgtattcaaccaggagataagatg
gccggtcgtcacggtaacaagggtgttatttcaaacatcgttcctgtggaagacatgcca
tatgatgatcaaggtgtaccagtagacatcgtgttgaaccctctgggtgtaccatcacgt
atgaacattggtcaggttcttgaaacgcaccttggttgggcggcaaaaggcgttggtgaa
aaaatcggtgagctattagacactggtaaagcaccgaaaacagttaaaacgttcttgaat
aaagtttataaccaccgcgatgacaaaactgttgatttatcagaaatgactgatgatgaa
gtgatgaacatggctggtaacttacgtaacggtgtgccaatggcaacgccagtattcgat
ggcgcagcagaaacagacattcatgcaatgtttgatttagctgagttaccgaaatcgggc
caaacctggttatacgacggtcgtaccggtgataagttcgaacgtcctgtgacggtgggt
tacatgtacatgctgaaactgaaccacttagttgacgacaagatgcacgcccgttctact
ggctcgtacagtcttgtaacgcaacagcctctgggcggtaaagctcagttcggtggtcag
cgtttcggtgagatggaagtttgggcacttgaagcttatggcgcagcttacacgcttcaa
gaaatgcttacggttaaatcggatgacgttaacggtcgtacgcgcatgtacaaaaacatc
gttgatggtaatcaccagatggagccaggcatgccagaatcgttcaatgtattgactaaa
gagatcaaatctctagcgatcaacattgaacttgagcatgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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