KEGG   Komagataeibacter nataicola: B0W47_05095
Entry
B0W47_05095       CDS       T04737                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
kna  Komagataeibacter nataicola
Pathway
kna03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B0W47_05095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kna03021]
    B0W47_05095
   03400 DNA repair and recombination proteins [BR:kna03400]
    B0W47_05095
Enzymes [BR:kna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B0W47_05095
Transcription machinery [BR:kna03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B0W47_05095
DNA repair and recombination proteins [BR:kna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B0W47_05095
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 DUF6218 DOCK-C2
Other DBs
NCBI-ProteinID: AQU86958
UniProt: A0A9N7H2M0
Position
complement(1038444..1042616)
AA seq 1390 aa
MNAITKSFTGRKRIRKSFGHIPEVAPMPNLIDVQRASYETFLQMNVAPDSRTPTGLQEVF
RSVFPINDFAGRGRLEFVSYELEEPKYDVEECIQRGLTFAAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKFL
FAARVIPYRGSWLDFEFDSKDLIYVRIDRKRKLPVTTLLYALEGAASEAARAAKAAEGGD
VESMEIQGMDPDEILSYFYGKVEFTKTEKGWARRFDAEAFRGQKLLEPLIDAQTGEEVAP
ADAKLTARMVRKIAETTKEVLVGPAGLIGRFIASDIVNEHTGEIYAEAGDELTEQKLEEL
ESEGLTTLTTLAVDAANGPWIRNTLAVDKNASREEALTDIYRVMRPGEPPTPETAEAMFS
GLFFDPDRYDLSAVGRVKMNMRLGVDVPDTVRVLRKEDTLRTVKIMCELKDGRGAIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLATYAKVNKYGFIETPYRMVEDGVLQDGWKYLSAMEEEKLIVAQADAKQDAQ
GHLTDDLVSVRRGGDFRQVPPTEVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNMQ
RQAVPLVRSDAPLVGTGMEAAVAHDSGAAIVARRHGVVDQIDGARIVVRATDDAGATQGV
DIYRLRKYMRSNQSTCINQRPLVRVGDQVRAGEIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILISERIARDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDEA
GIVYVGAEVNPGDILIGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLKLPPGTTGTI
VDVRVFSRRGVDKDERAMAIERAEIERLAKDRDDERAIQERSFYNRLREHLIGQTAGAGF
KGIRSGTEITDEVLSEHPRGAWRNITVVSDEVMAELETLRREFDAAVAKIQARFDNKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTSVD
IVLNPLGVPSRMNVGQILETHLGWACANIGRQIGQLANDYQRTGEKRQELLDELKSVYGD
AVYDEQIGDMTDGQLLELCGNLRKGVPIATPVFDGASIPDIEAMLTRAGVDKSGQSQLID
GRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQLGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREQDDFEAGIPESFNVLIKELKSLG
LNVDLEQSGN
NT seq 4173 nt   +upstreamnt  +downstreamnt
atgaacgcgattacgaaatcgttcacgggacgcaaacgcatccgcaagagcttcgggcac
atacccgaagtggctccgatgcccaatctgattgacgtgcagcgggcaagctacgaaacg
ttccttcagatgaatgtggcgcccgacagccggacgccgacgggcctgcaggaagtgttc
cgttccgtctttccgatcaatgacttcgcggggcgcgggcgtctggagttcgtaagctac
gaactcgaggagccgaaatacgacgttgaggaatgcatccagcgcgggctgacctttgcc
gccccgctgaaggtgatcctgcgcctgatcgtgtgggatgtggatgaggataccggatcg
cgctcgatccgcgatatcaaggaacagccggtctatatgggcgacatgccgctcatgacc
gataacggcaccttcatcatcaacggcaccgagcgcgtcatcgtcagccagatgcatcgc
agccccggtgtgttctttgaccatgacaagggcaagacccactcctcgggcaagttcctg
tttgccgcgcgtgtcattccctatcgtggctcgtggcttgatttcgagttcgacagcaag
gacctgatctacgtccgtatcgaccgcaagcgcaagctgccggtcacgacgctgctgtac
gccctcgaaggcgctgcctccgaggccgcccgcgccgccaaggccgccgagggcggggat
gtggagtcgatggaaatccagggcatggaccctgatgagatcctgtcctacttctacggc
aaggttgagttcaccaagaccgagaagggctgggcgcgccgtttcgatgccgaagccttc
cgtggccagaagctgctcgaaccgctgatcgacgcccagaccggcgaggaagtggcgccg
gccgatgccaagctgaccgcgcgcatggtccgcaagatcgccgagaccaccaaggaggtg
cttgtcggccccgcagggctgatcggccgcttcattgcaagcgatatcgtcaacgagcac
accggtgagatctatgccgaggctggcgacgagctgaccgagcagaagcttgaggaactc
gagagcgaaggcctgaccacgctgaccacgctggcggtggacgcggccaatggcccgtgg
atccgcaatacgctggcggtggacaagaacgcctcacgcgaggaagcgctgaccgacatc
taccgtgtcatgcgccccggcgagccgcccacgcccgagacggcggaagcgatgttctcc
ggcctgttcttcgaccccgaccgctacgacctgtccgccgtgggccgcgtgaagatgaac
atgcgccttggcgtggacgtgcccgacacggtgcgcgtgctgcgcaaggaagacactctg
cgcaccgtcaagatcatgtgcgagctgaaagacggccgcggcgcgatcgacgatatcgac
aacctcggcaaccgtcgtgtccgctccgtgggcgaactgatggagaaccagtaccgcgtc
ggcctgctgcgcatggagcgcgccatccgcgagcgtatgggctcggtcgatatcgatacg
gtcatgccgcatgacctgatcaacgccaagccggctgccgccgccgtgcgcgagttcttc
ggctcctcgcagctcagccagttcatggaccagaccaacccgctctcggaagtgacgcac
aagcgccggctctcggcgcttggcccgggtggtctgacacgtgagcgcgcgggctttgaa
gtccgtgacgtgcacccgacgcattatggccgcatctgtccgatcgagacgccggaaggc
ccgaacatcggtctgatcaactcgctggccacctatgccaaggtgaacaagtacggcttt
atcgaaaccccgtaccgcatggtcgaggacggcgtgcttcaggatggctggaaatatctt
tccgccatggaagaagagaagctgatcgtcgcccaggccgatgcgaagcaggacgcgcag
ggtcatctgaccgatgacctggtctccgtgcgccgtggcggcgacttccgccaggtgccc
ccgaccgaggtgaccgcctgcgacgtgtcacccaagcagcttgtctctgtagccgcggca
ctcattccgttccttgagaacgatgacgccaaccgcgccctgatgggttcgaacatgcag
cgtcaggcggtgccactggtgcgctctgatgcgccgctggtcggcacgggcatggaagcg
gctgtggcgcacgattccggcgccgccatcgtggcccgccgccatggcgtggtggaccag
atcgacggtgcgcgtatcgtggtgcgcgccaccgatgatgccggtgcgacgcagggcgtg
gatatctaccgcctgcgcaaatacatgcgctccaaccagtccacctgcatcaaccagcgt
ccgctggtgcgcgtgggtgaccaggtgcgtgcgggcgagatcatcgccgatggtccctcc
accgagctgggtgaactggcgctgggccgcaacgtgctggtcgcgttcatgccttggaac
ggttacaacttcgaagattcgatcctgatttccgagcggatcgcgcgtgatgatgtgttt
acctcgatccatatcgaggaattcgaggtcatggcccgcgacaccaagctgggccaggaa
gagatcacgcgcgacattcccaatgttggcgaggaagccctgcgcaacctcgatgaggcg
ggcatcgtctatgtcggcgcggaagtgaaccccggcgatatcctgatcggcaaggtcacg
cccaagggcgaaagcccgatgacgccggaagaaaagctgctgcgcgccattttcggcgaa
aaggcgtccgacgtccgcgacacctcgctcaagctgccgcccggcacgaccggcaccatc
gttgacgtgcgcgtcttctcccgccgtggcgtggacaaggacgagcgcgcaatggccatc
gagcgcgccgagatcgaacgcctcgccaaggaccgtgatgacgagcgcgccattcaggag
cgttccttctacaaccgtctgcgcgagcacctgatcggccagactgcgggtgcaggcttc
aagggcatccgttcgggcaccgagatcacggacgaggttctctccgagcatccgcgcggt
gcatggcgcaacatcactgtcgtgtccgatgaggtcatggcggaactcgagacgctgcgc
cgtgagtttgacgcggcggtggccaagatccaggcccgcttcgacaacaaggtcgagaag
ctgcagcgtggtgatgaactgccgccgggcgtgatgaagatggtcaaggtctttgtcgcg
gtaaagcgcaagctgcagccgggtgacaagatggctggccgtcatggcaacaagggtgtc
gtctcgcgcgttgtgccggtggaagacatgccgttccttgaagatggcacatcggtcgat
atcgtgctcaacccgctcggcgtgccttcgcgcatgaacgtggggcagatcctcgagacg
catctgggctgggcgtgcgccaatattggccgccagatcggtcagctggccaatgactac
cagcgcacgggcgagaagcggcaggaactgcttgatgaactgaagtcggtctatggcgac
gcggtttatgacgagcagatcggtgacatgaccgatggccagctgctcgaactgtgcggc
aacctgcgcaagggcgtgccgatcgcgaccccggtgttcgatggcgcgtccatccccgac
atcgaggcgatgctgacccgggcgggcgtggacaagtccggccagtcgcagctgatcgac
gggcgcacgggcgagccgttcgagcgcaagaccacggtcggctacatctacatgctcaag
ctgcatcatcttgttgatgacaagatccatgcccgttccatcggtccgtattcgctggtg
acccagcagccgctgggcggtaaggcgcagttaggtgggcagcgctttggtgagatggaa
gtgtgggcgctcgaggcatacggcgccgcctacacgctgcaggaaatgctgacggtcaaa
tcggatgacgtgtccggtcgtaccaaggtctatgaggccatcgtgcgcgagcaggatgat
ttcgaggccggtattccggaaagcttcaacgtgctgatcaaggaactgaagtcccttggc
ctgaatgttgacctggaacagagcggtaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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