KEGG ORTHOLOGY: K12589

ORTHOLOGY: K12589

Entry

K12589 KO

Name

RRP42, EXOSC7

Definition

exosome complex component RRP42

Pathway

ko03018

RNA degradation

Module

M00390	Exosome, archaea
M00391	Exosome, eukaryotes

Brite

KEGG Orthology (KO) [BR:ko00001]
Genetic Information Processing
  Folding, sorting and degradation
   03018 RNA degradation
    K12589  RRP42, EXOSC7; exosome complex component RRP42
KEGG pathway modules [BR:ko00002]
Structural complex
  Genetic information processing
   RNA processing
    M00390  Exosome, archaea
     K12589  RRP42, EXOSC7; exosome complex component RRP42
    M00391  Exosome, eukaryotes
     K12589  RRP42, EXOSC7; exosome complex component RRP42

Genes

HSA:	23016(EXOSC7)
PTR:	460313(EXOSC7)
PPS:	100981360
GGO:	101137532(EXOSC7)
PON:	100458989(EXOSC7)
MCC:	714624(EXOSC7)
MMU:	66446(Exosc7)
RNO:	316098(Exosc7)
CFA:	476654(EXOSC7)
AML:	100484320
FCA:	101081873(EXOSC7)
BTA:	100847343 100849348
SSC:	100511347(EXOSC7)
ECB:	100065722
MDO:	100618055
SHR:	100933501(EXOSC7)
OAA:	100681439
GGA:	420704(EXOSC7)
MGP:	100540946
TGU:	100221537(EXOSC7)
ACS:	100559756 100560496
XLA:	446601(exosc7)
XTR:	100216070 496941(exosc7)
DRE:	550247(exosc7)
TRU:	101062408
OLA:	101160328
BFO:	BRAFLDRAFT_280121
CIN:	100184256
SPU:	589465
DME:	Dmel_CG8395(Rrp42)
DPO:	Dpse_GA21043
DAN:	Dana_GF11284
DER:	Dere_GG20559
DPE:	Dper_GL10119
DSE:	Dsec_GM21652
DSI:	Dsim_GD11151
DWI:	Dwil_GK21414
DYA:	Dyak_GE11745
DGR:	Dgri_GH22060
DMO:	Dmoj_GI19145
DVI:	Dvir_GJ22278
AGA:	AgaP_AGAP010483
AAG:	AaeL_AAEL005851
AME:	411836
NVI:	100116784(NV16113)
TCA:	655841
API:	100169389
PHU:	Phum_PHUM530150
ISC:	IscW_ISCW015101
CEL:	CELE_F31D4.1(exos-7)
CBR:	CBG05573(Cbr-exos-7)
BMY:	Bm1_13250
TSP:	Tsp_06288
SMM:	Smp_179010
NVE:	NEMVE_v1g124306
HMG:	100212310
TAD:	TRIADDRAFT_55798
AQU:	100642061
ATH:	AT3G07750
ALY:	ARALYDRAFT_671605
GMX:	100818134
MTR:	MTR_8g077430
CSV:	101207820
RCU:	RCOM_0347880
POP:	POPTR_834971
VVI:	100261229
OSA:	4352037
DOSA:	Os12t0403800-02(Os12g0403800)
BDI:	100845366
SBI:	SORBI_10g031070(SORBIDRAFT_10g031070)
ZMA:	100856959
SMO:	SELMODRAFT_102800
PPP:	PHYPADRAFT_191431
CRE:	CHLREDRAFT_114244(RNPH3)
VCN:	VOLCADRAFT_90878
OTA:	Ot11g03100
SCE:	YDL111C(RRP42)
AGO:	AGOS_ADL295W
ERC:	Ecym_3358
KLA:	KLLA0E09219g
LTH:	KLTH0F09372g
PPA:	PAS_chr3_1067
VPO:	Kpol_534p9
ZRO:	ZYRO0F07920g
CGR:	CAGL0H10384g
NCS:	NCAS_0D00800(NCAS0D00800)
NDI:	NDAI_0H03350(NDAI0H03350)
TPF:	TPHA_0G00970(TPHA0G00970)
TBL:	TBLA_0B09550(TBLA0B09550)
TDL:	TDEL_0G02560(TDEL0G02560)
KAF:	KAFR_0B04720(KAFR0B04720)
DHA:	DEHA2G17028g
PIC:	PICST_43184
PGU:	PGUG_04533
LEL:	LELG_04540
CAL:	CaO19.12506(RRP42) CaO19.5039(RRP42)
CTP:	CTRG_00316
CDU:	CD36_43580
COT:	CORT_0E03810
YLI:	YALI0D11000g
CLU:	CLUG_03863
NCR:	NCU01806
SMP:	SMAC_02489
PAN:	PODANSg6703
TTT:	THITE_2123746
MTM:	MYCTH_2312035
MGR:	MGG_06683
FGR:	FG10879.1
NHE:	NECHADRAFT_40151
VAL:	VDBG_03680
SSL:	SS1G_00987
BFU:	BC1G_08531
ANI:	AN6244.2
NFI:	NFIA_088310
AFM:	AFUA_2G13130
AOR:	AOR_1_510014(AO090026000270)
ANG:	ANI_1_264024(An02g01970)
AFV:	AFLA_136550
ACT:	ACLA_071950
PCS:	Pc12g07260
CIM:	CIMG_05094
CPW:	CPC735_068120
PBL:	PAAG_06270
URE:	UREG_06460
ABE:	ARB_04826
TVE:	TRV_06873
AJE:	HCAG_05940
PNO:	SNOG_07057
PTE:	PTT_19268
ZTR:	MYCGRDRAFT_34343
TML:	GSTUM_00008655001
SPO:	SPBC16G5.10
LBC:	LACBIDRAFT_305471
SCM:	SCHCODRAFT_16010
MGL:	MGL_1145
PGR:	PGTG_09713
MBR:	MONBRDRAFT_24698
NGR:	NAEGRDRAFT_30524
DDI:	DDB_G0280251
DPP:	DICPUDRAFT_29826
EHI:	EHI_188080(75.t00036)
EDI:	EDI_208220
PFA:	MAL13P1.204
PFD:	PFDG_00990
PFH:	PFHG_02103
PYO:	PY02553
PCB:	PC000726.00.0
PBE:	PB000650.03.0
PKN:	PKH_121400
PVX:	PVX_082925
PCY:	PCYB_122310
BBO:	BBOV_IV008760(23.m05910)
CPV:	cgd8_340
TGO:	TGME49_002750
PTI:	PHATRDRAFT_55141(RRP)
TPS:	THAPSDRAFT_23018
PIF:	PITG_16138
MAC:	MA1776(rrp42)
MBA:	Mbar_A2507
MMA:	MM_2624
MMAZ:	MmTuc01_2683
MBU:	Mbur_0200
MMH:	Mmah_0797
MEV:	Metev_0598
MZH:	Mzhil_1168
MPY:	Mpsy_2730
MHZ:	Metho_1886
MTP:	Mthe_1361
MCJ:	MCON_3154
MHI:	Mhar_2161
MPD:	MCP_2626
MEZ:	Mtc_0865
RCI:	RCIX2125(rrp42p)
MTH:	MTH682
MMG:	MTBMA_c10690(rpr41)
MST:	Msp_1252
MSI:	Msm_0241
MRU:	mru_1352(rrp42)
MEL:	Metbo_2184
MEW:	MSWAN_0462
MFV:	Mfer_0825
MKA:	MK0380
AFU:	AF0494
APO:	Arcpr_0513
AVE:	Arcve_1052
AST:	Asulf_02229
FPL:	Ferp_0303
TAC:	Ta1294m
TVO:	TVN0308
PTO:	PTO0393
TAR:	TALC_00326
PHO:	PH1548
PAB:	PAB0421
PFU:	PF1567
PFI:	PFC_07065
PYN:	PNA2_0135
PYA:	PYCH_03860
PYS:	Py04_1443
TKO:	TK1633
TON:	TON_0031
TGA:	TGAM_2035(rrp42p)
TSI:	TSIB_1348
TBA:	TERMP_00164
THE:	GQS_05105
THA:	TAM4_195
THM:	CL1_0667
ABI:	Aboo_0181
ACF:	AciM339_0869
MAX:	MMALV_02970
APE:	APE_1445
SMR:	Smar_0860
SHC:	Shell_1609
IHO:	Igni_0209
DKA:	DKAM_1323
DMU:	Desmu_1314
DFD:	Desfe_1418
TAG:	Tagg_1333
IAG:	Igag_1505
THG:	TCELL_0413
HBU:	Hbut_0572
PFM:	Pyrfu_1745
SSO:	SSO0732
SOL:	Ssol_1791
STO:	ST0442
SAI:	Saci_0609
SACN:	SacN8_02960
SACR:	SacRon12I_02950
SIS:	LS215_1502
SIA:	M1425_1407
SIM:	M1627_1457
SID:	M164_1401
SIY:	YG5714_1402
SIN:	YN1551_1441
SII:	LD85_1612
SIH:	SiH_1353
SIR:	SiRe_1275
SIC:	SiL_1266
MSE:	Msed_0078
MCN:	Mcup_1979
AHO:	Ahos_0832
PAI:	PAE2206
PIS:	Pisl_0835
PCL:	Pcal_0932
PAS:	Pars_1938
PYR:	P186_0441
POG:	Pogu_0185
TNE:	Tneu_1380
CMA:	Cmaq_0168
TUZ:	TUZN_0477
TTN:	TTX_0821
VDI:	Vdis_0833
VMO:	VMUT_1679
TPE:	Tpen_0580
ASC:	ASAC_1137
CLG:	Calag_0432
FFO:	FFONT_1339
NMR:	Nmar_0433
NIR:	NSED_02250
NKR:	NKOR_02155
CSY:	CENSYa_1535
NGA:	Ngar_c23850(ecx1)
NEQ:	NEQ111
KCR:	Kcr_1369

» show all

Reference

PMID:17942686

Authors

Wang HW, Wang J, Ding F, Callahan K, Bratkowski MA, Butler JS, Nogales E, Ke A

Title

Architecture of the yeast Rrp44 exosome complex suggests routes of RNA recruitment for 3' end processing.

Journal

Proc Natl Acad Sci U S A 104:16844-9 (2007)

Reference

PMID:16939780

Authors

Schilders G, van Dijk E, Raijmakers R, Pruijn GJ

Title

Cell and molecular biology of the exosome: how to make or break an RNA.

Journal

Int Rev Cytol 251:159-208 (2006)

Reference

PMID:17471261

Authors

Hartung S, Hopfner KP

Title

The exosome, plugged.

Journal

EMBO Rep 8:456-7 (2007)

Reference

PMID:19239894

Authors

Houseley J, Tollervey D

Title

The many pathways of RNA degradation.

Journal

Cell 136:763-76 (2009)

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (339)   
   KEGG PATHWAY (2)   
   KEGG MODULE (337)   
Gene (468)   
   KEGG GENES (267)   
   KEGG DGENES (20)   
   KEGG EGENES (106)   
   KEGG MGENES (75)   
Protein sequence (239)   
   UniProt (239)   
Literature (4)   
   PubMed (4)   
All databases (1052)   

Download RDF

DBGET integrated database retrieval system