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Entry
K12608                      KO                                     

Name
CAF16
Definition
CCR4-NOT complex subunit CAF16
Pathway
ko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ko00001]
 Genetic Information Processing
  Folding, sorting and degradation
   03018 RNA degradation
    K12608  CAF16; CCR4-NOT complex subunit CAF16
Messenger RNA biogenesis [BR:ko03019]
 Eukaryotic Type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     K12608  CAF16; CCR4-NOT complex subunit CAF16
BRITE hierarchy
Other DBs
COG: COG1131
Genes
RSS: 109442557
ATH: AT1G03905(ABCI19) AT5G02270(ABCI20) AT5G44110(ABCI21)
ALY: ARALYDRAFT_311479 ARALYDRAFT_349529(ATNAP9) ARALYDRAFT_494585
CSAT: 104708921 104725053 104734230 104738895 104754513 104760535 104761331 104768392 104771568
EUS: EUTSA_v10003252mg EUTSA_v10008378mg EUTSA_v10014095mg
BRP: 103836597 103839200 103847464
BNA: 106372575 106402276 106416513 106433562 106438830 111200407
BOE: 106303943 106308355 106309554 106313863 106316451
THJ: 104801149 104827018
CPAP: 110807651 110826211
LJA: Lj0g3v0014269.1(Lj0g3v0014269.1) Lj5g3v1117160.1(Lj5g3v1117160.1) Lj5g3v1530110.1(Lj5g3v1530110.1)
CSV: 101212096(ABCA19) 101215594
DOSA: Os02t0810300-01(Os02g0810300) Os03t0316900-01(Os03g0316900)
ATS: 109742870(LOC109742870) 109747892(LOC109747892)
ZMA: 100191337(AY110217) 100282925
SCE: YFL028C(CAF16)
ERC: Ecym_1500
KMX: KLMA_20309(CAF16)
NCS: NCAS_0C03820(NCAS0C03820)
NDI: NDAI_0G03160(NDAI0G03160)
TPF: TPHA_0D00450(TPHA0D00450)
TBL: TBLA_0D02530(TBLA0D02530)
TDL: TDEL_0C00680(TDEL0C00680)
KAF: KAFR_0C03470(KAFR0C03470)
CAL: CAALFM_C108430WA(CAF16)
CAUR: QG37_02724
SLB: AWJ20_2867(CAF16)
NCR: NCU04097
NTE: NEUTE1DRAFT127329(NEUTE1DRAFT_127329)
MGR: MGG_09520
MAW: MAC_05105
MAJ: MAA_09985
CMT: CCM_01393
MBE: MBM_08274
ANI: AN6512.2
ANG: ANI_1_1090134(An15g00220)
ABE: ARB_04298
TVE: TRV_05409
PTE: PTT_01447
SPO: SPAC20G4.01(caf16)
CNE: CNE04760
CNB: CNBE4760
ABP: AGABI1DRAFT113502(AGABI1DRAFT_113502)
ABV: AGABI2DRAFT191849(AGABI2DRAFT_191849)
MGL: MGL_1852
PFA: PF14_0321
PYO: PY17X_1012400(PY06911)
PCB: PCHAS_101170(PC000102.02.0)
SMIN: v1.2.009022.t1(symbB.v1.2.009022.t1) v1.2.019453.t1(symbB.v1.2.019453.t1)
SPAR: SPRG_09357
TBR: Tb927.6.2810(Tb06.5F5.330)
 » show all
TaxonomyKoalaUniProt
Reference
  Authors
Liu HY, Chiang YC, Pan J, Chen J, Salvadore C, Audino DC, Badarinarayana V, Palaniswamy V, Anderson B, Denis CL
  Title
Characterization of CAF4 and CAF16 reveals a functional connection between the CCR4-NOT complex and a subset of SRB proteins of the RNA polymerase II holoenzyme.
  Journal
J Biol Chem 276:7541-8 (2001)
DOI:10.1074/jbc.M009112200
  Sequence
[sce:YFL028C]

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