KEGG   Klebsiella oxytoca CAV1374: AB185_23795
Entry
AB185_23795       CDS       T04534                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
koc  Klebsiella oxytoca CAV1374
Brite
KEGG Orthology (KO) [BR:koc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:koc03032]
    AB185_23795
   03400 DNA repair and recombination proteins [BR:koc03400]
    AB185_23795
Enzymes [BR:koc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AB185_23795
DNA replication proteins [BR:koc03032]
 Prokaryotic type
  DNA Topoisomerases
   AB185_23795
DNA repair and recombination proteins [BR:koc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AB185_23795
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_ribbon_recom Toprim_4
Other DBs
NCBI-ProteinID: AKL36733
Position
complement(3922211..3924808)
AA seq 865 aa
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERGALVNRMGVDPWHDWNAHYEILPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDALPLQVTH
NGDKPFRPVNRDETMAAVALLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALSMVRGYIGDNFGKKYLPESANQYASKEN
SQEAHEAIRPSDVNVLAETLKDMESDAQKLYQLIWRQFVACQMTPAQYDSTTLTVKAGDF
KLKARGRTLRFDGWTKVMPALRKGDEDRTLPMVNKGDSLSLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLMNY
DFTAQMEDRLDQVANHQAEWKQVLDSFFGDFTSQLQTAEKEPEEGGMQPNPMVLTTIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLAEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYV
ASEKDGKATGWSAFYIDGKWTEAKK
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgtcggtcatatccgcgatttgccgaccagt
ggctcagcttccaaaaagagcgccgactctacctccaccaaaggggctaaaaagcctaag
aaggatgaacgcggcgctctggtcaaccgtatgggcgtggacccgtggcatgactggaat
gcgcactatgaaatactcccgggtaaagaaaaggtcgtttctgaactcaaacagttggcg
gaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccatcgca
tggcacctgcgggaagttatcggcggtgatgaacagcgctatagccgcgtggtgttcaac
gagatcacgaagaatgcgattcgtcaggctttcgaaaagccgggcgaactgaatattgac
cgtgtcaacgctcagcaggcgcgccgttttatggatcgcgtggtgggctacatggtctct
ccactgctgtggaaaaaaattgcccgcggtctgtcagcaggccgcgtccagtcggttgcg
gtgcgtctggtggtcgagcgcgagcgcgaaattaaagcgttcgttccggaagagtactgg
gaagttgacgccagcaccacgacccctggcggcgatgcgttaccgctgcaggtcacgcat
aacggcgataagccgttccgtccggtaaaccgtgatgaaaccatggcggcggtcgcgctg
cttgagaaagccagctacagcgtgctggagcgtgaagataagccgaccagcagcaagccg
ggcgcgccgtttatcacctccacgctgcagcaggccgccagcacgcgtcttggcttcggc
gtgaagaaaaccatgatgatggcgcagcgtctctacgaagcgggccacattacctatatg
cgtaccgactcgacgaacctgagccaggacgcgctgagcatggtgcgcggctacattggc
gacaacttcggtaagaaatatctgccggagagcgcgaatcagtacgccagcaaagaaaac
tcgcaggaagcgcacgaggcgattcgtccatccgacgtcaacgtgctggccgaaacgtta
aaagatatggaatctgatgcgcagaaactgtatcagctgatctggcgccagtttgtcgcc
tgtcagatgacgcctgcgcagtacgactccaccacgctgacggtgaaagccggcgatttc
aaactgaaagcccgcgggcgtacgctgcgctttgacggctggaccaaagtaatgccagct
ctgcgtaaaggcgatgaagaccgtactttaccgatggtcaataagggcgacagcctgagc
ctggtcgagctgacccctgcgcagcactttaccaagccgccggcgcgttttagcgaggct
tcgctggttaaagagctggaaaaacgcggcatcggtcgtccgtccacctatgcgtcgatc
atttcgaccattcaggatcgcggctacgtgcgggtggaaaaccgccgcttctatgcggaa
aagatgggcgaaatcgtcaccgatcgtctggaagagaacttccgcgatctgatgaactat
gatttcaccgcgcagatggaagaccgcctcgaccaggtggctaaccatcaggccgagtgg
aagcaggtcctcgacagcttcttcggagactttacctcgcagctgcagacggcagagaaa
gagccggaagagggcggcatgcagccgaacccaatggtgctgaccaccatcgactgccca
acctgcgggcgcaagatggggatccgtaccgccagcaccggcgtattcctcggctgctcg
ggctacgcgctgtcgccaaaagagcgctgtaaaaccaccattaacctggtgccggaaaac
gaagtgctcaacgtgctggaaggcgatgacgctgaaaccaacgcgctgcgcgctaaacgc
cgctgtaaaaaatgcggcacggcgatggacagctacctcatcgatccgaagcgcaagctg
cacgtctgcggtaataacccgacctgcgatggctacgagatcgaagagggcgagttccgc
atcaagggctatgacggcccgatcgttgagtgtgaaaaatgtggctccgaaatgcacctg
aagatggggcgttttggtaagtatatggcctgcaccaacgacgagtgtaaaaacacccgt
aagatcctgcgtaacggggaagtggcgccgccgaaagaagatccggtgccgctgccggag
ctgccgtgcgagaaatcggacgcttactttgttctgcgcgatggcgcggcgggcgtcttc
ctggccgccaacaccttcccgaaatcgcgcgaaacccgcgcgccgctggtggaagagctg
taccgcttccgcgaccgtctggcggagaagctgcgctatctggccgatgcgccgcagcag
gatccggaaggcaacaaaacgatggtgcgttttagccgtaaaactaagcagcagtacgtt
gcctcagagaaagatggcaaagccaccggctggtcagctttctatatagatggcaaatgg
actgaagcaaagaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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