KEGG   Klebsiella oxytoca KONIH1: KONIH1_12260
Entry
KONIH1_12260      CDS       T03269                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
kok  Klebsiella oxytoca KONIH1
Brite
KEGG Orthology (KO) [BR:kok00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kok03016]
    KONIH1_12260
Enzymes [BR:kok01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     KONIH1_12260
Transfer RNA biogenesis [BR:kok03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    KONIH1_12260
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 PilZ OSR1_C ODP
Other DBs
NCBI-ProteinID: AID89814
Position
complement(2598044..2599978)
AA seq 644 aa
MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI
IAVVNTEKERESAEPEELVEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQYITYGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERRDLTALAFVTIDSASTEDMDDALYVEQTADGKLHLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMILADDGAIEDDIQF
FAATIESKAKLAYDDVSDWLENNGGWQPGSETIAQQIKLLQDACLRRSEWRKNHALVFKD
RPDYRFVLGDKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPVEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEAISRPQDDVAIQMAERRRLNRM
AERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagactccg
cgcgtagaaggggtcgttaaggggacggaaaaaggatttggcttcctcgaagtcgactcg
cagaaaagctatttcattccgccgccgcaaatgaaaaaagtgatgcatggcgatcgtatt
atcgccgtggtcaatactgaaaaggaacgcgaaagcgctgagcctgaagaactggttgag
ccgttcctgacgcgttttgtcggcaaagttcataagaaagacgatcgtctttccatcgtt
cctgaccatccgctgctgaaagatgccattccttgccgcgccgcgcgcggcgtagagcat
gattttaaagagggtgactgggccgttgccgaaatgcgccgtcatccgctgaaaggcgac
cgcggtttctacgctgagctcacccagtacattacctacggcgacgatcatttcgttcca
tggtgggtcaccctggcgcgtcataatctggaaaaagaagcgccggacggcgtggcgacc
gagatgcttgatgaaggtctggaacgccgtgatttaacggccctggctttcgtgaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtacgttgagcaaaccgctgacggc
aagctgcatctgaccgtcgctatcgccgatccgaccgcgtggattgccgaaggcagcaag
ctggacaacgcggcgaaaattcgcgcctttaccaactatctgccgggcttcaacattccg
atgctgccgcgcgagctctcggacgacctctgctctctgcgccccaacgaggttcgcccg
gttctggcctgccgcatgatcctcgcggatgacggcgccatcgaagatgatattcagttc
ttcgcggcgaccatcgagtcgaaagcgaagctggcctacgatgatgtttccgactggctg
gaaaataacggtggctggcagccgggaagcgagactatcgcccagcaaattaagctgctg
caggacgcctgcctgcgtcgtagcgaatggcgtaaaaaccacgcgctggtattcaaggac
cgcccggattaccgctttgtgcttggcgacaagggtgaagtgctggatatcgtcgccgaa
ccgcgtcgtatcgccaaccgcatcgttgaagagtcaatgattgccgccaacatctgtgcc
gcccgcgtgctgcgcgacaaactcggtttcggcgtttataacgtccataccggtttcgat
ccggccaacaccgagcagctcgcggccttactgaagactcacgatgtgcacgttgacccg
gtggaagtgctgacgctggaaggcttctgcaagctgcgtcgcgagctggacgcgcagccg
tctggtttcctcgatagccgtattcgtcgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcacttcggcctgggccttgaggcctatgcgacctggacttccccgatccgt
aagtacggcgatatgattaaccatcgtctgctgaaagcgattatcaaaggggaagcgatc
tcccgcccgcaggatgacgttgcgatccaaatggctgaacgccgtcgcctcaaccgcatg
gcggagcgcgatgttggagactggctgtacgcccgctatctgaatccgcaggccggcacc
actacccgttttgcagctgagattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gttgataacggcgcggttgcctttatcccggcgccgttccttcacgccgtgcgcgatgaa
ctggtgtgcagccaggaaaacggcaccgtgcagatcaaaggcgaagtcgtctacaaagtc
acggatgttatcgacgtcacgattgccgaagtgcgcatggaaacccgtagcgtgattgcg
cgtccagccgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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