KEGG   Candidatus Kinetoplastibacterium oncopeltii: CONE_0717
Entry
CONE_0717         CDS       T02471                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
kon  Candidatus Kinetoplastibacterium oncopeltii
Pathway
kon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CONE_0717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kon03019]
    CONE_0717
   03009 Ribosome biogenesis [BR:kon03009]
    CONE_0717
Enzymes [BR:kon01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CONE_0717
Messenger RNA biogenesis [BR:kon03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CONE_0717
Ribosome biogenesis [BR:kon03009]
 Prokaryotic type
  rRNA processing factors
   CONE_0717
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AGF48458
UniProt: M1L784
Position
511042..513597
AA seq 851 aa
MKRMLFNATHQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGTITRVEPGLEACFINY
GEDKHGFLPFKEITKNYFKEGIDIKGARIQDVITEGLELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGEERQELRETMEQLSVPEGMSIIARTAGIGRTSNELQ
WDLSYLLQLWNAIDKASSENQSPILIYLESSLVIRAIRDYFSPNISEILIDNDDIVKQVT
AFMSIVMPDNIQRVKHYQSDVPLFSRFQIEHQIETAYSRMIQLPSGGSIVIDHTEALVAI
DVNSAKSTRGSDIEETALLTNQEAADEVARQLRLRDLGGLIVIDFIDMDDAKNQRSVEQR
LRESLRVDRARVQMGKISKFGLIELSRQRLRPALNEASHKICPRCTGTGVIRDTESSALQ
ILRLIQEEAMKEGTYIIHAQVPVDVATYLLNEKRNDINNIESQQKIKLILIPNKYLETPN
YNIERLKQDDQKLEENKTSFRMIDAPINNIIFNNSETEEKIRPEAIVKTATPSQPAPMPI
IKKDINKVKKNNIFKIILSWLWRKNTKNSDNNIEGISNTENSRILKVDRKYKYKNKQQNK
ISQNRKQPLNNEINDVNNKTESQTVYANKQLDTVNEDKNINSTINNKKDSIKNKRNILND
QSIVQNEEKLSKQITQDIDIANLTNVSPISEKSERKYVNRRRHNKKNRDFDNSLIKATDK
IDHSFSSNLNVDSSKAQDIDLEKNKMNPIPEISISKKIDDDNQLLKSKLTNFTLNNAEGN
ISLEDKTKTSDSQGINLGILKMVETKTNDIHGNIEASNISAKLGRKTYVSDLSNCNKENN
RKPLIQVETKK
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttatttaatgcaacgcaccaagaagaacttcgcgttgcaattgttgat
gggcaaaaacttatagatattgatatagaaacagctggacgagaacaacgtaaaggcaac
atatataaaggaactattacaagagtagaacctggtttagaggcatgctttatcaattat
ggtgaggataaacatggattccttccttttaaagaaataactaaaaattatttcaaagaa
ggtattgatatcaaaggagctaggatacaagatgttataacggaaggcttagaactaata
gtacaagtagaaaaggaagagcgtggcaacaaaggagctgcacttaccactttcatttct
ctagcaggaagatatctagttcttatgccaaataacccaagaggtggtggagtatcccgt
agaatagaaggagaagaacgacaagaattacgagaaaccatggagcaattaagtgttcct
gaaggcatgagcattatagctcgcaccgctggtattggacgaacttcaaacgagcttcag
tgggatttatcctatttattacaattatggaatgcaatagataaagcatcatcagaaaat
caatctccaatacttatatacctagagtctagtttagtaataagagcaatccgtgattac
ttttcccctaacattagcgaaattctaatagacaatgacgatatagtaaaacaagtaact
gcatttatgagtatagtcatgcctgataatatacaacgtgtaaagcattatcagtctgat
gtgccactattctcaagatttcaaatagaacatcaaatagaaactgcttattctcgtatg
atacaactaccatctggaggatcaatagttattgatcatactgaagcattggttgctata
gatgtcaattcagcaaaatctacaagaggttctgatattgaggaaacagcccttctaact
aatcaggaagcagctgacgaagtagctagacaattaagactacgtgatctcggaggactt
attgttatagattttattgatatggatgatgcaaaaaatcaaagatcagtagaacaaagg
ttgagagaatctttaagagtggatagagctagagtacaaatgggcaagatatcaaaattt
ggcttgatagagctatctcgtcaaagattacgtccagcattgaatgaagcttctcataaa
atatgtccaagatgcacgggaactggtgtaattagagatacagagtcaagcgccttacaa
atactaaggttaattcaagaagaagcaatgaaagaaggaacttatattatacatgcacaa
gttccagtagatgttgctacttatctgcttaatgagaagcgtaatgatataaacaatata
gaaagtcaacaaaaaatcaaattgatattaataccaaataaatatttggaaacacccaat
tataatattgaaagactaaaacaagatgatcaaaagcttgaagaaaataaaacgagcttt
agaatgatcgatgcacctattaataatattatatttaataactcagagacggaagaaaaa
attcgtccagaagcaatagtaaaaacagctactccttctcaacctgctcctatgccaata
attaaaaaagatataaataaagtcaagaaaaataatatatttaaaataatattatcttgg
ctgtggagaaaaaatacaaaaaatagtgataataatattgaaggtatatccaatacagaa
aacagtagaattctaaaggttgatagaaagtataaatataagaataaacaacaaaataaa
atttcacaaaataggaaacaaccattaaataatgaaattaacgatgtaaataacaaaaca
gaatcacaaacagtttatgctaataagcaattggatactgtcaatgaagataaaaatata
aattcaactattaataataaaaaagattctataaaaaacaaacggaatattttgaatgat
caatctattgtgcaaaatgaagaaaaattatcaaagcaaatcacacaggatattgatatt
gcaaatttaacaaatgttagtcctatatcagagaaaagtgaacgtaagtacgttaaccgt
agacgtcataataaaaagaatcgtgattttgataattctttaataaaagctacggataag
atagatcattccttttcttcaaatctaaatgtagatagcagtaaagctcaagatatagat
ttagaaaaaaataaaatgaatcctatccccgaaattagtatttcgaaaaagatagatgat
gacaatcaattattgaaatcaaagttaacaaatttcacattaaataatgcagaaggcaac
atttctttggaagataaaacaaagacatctgatagtcaaggaataaacttaggcatctta
aaaatggttgaaacaaaaactaatgatattcatggaaatatagaggcaagtaacatatcc
gcaaaattaggaagaaaaacatatgtaagcgatttaagtaattgtaataaagaaaataat
agaaaacctttaatacaagtagaaacgaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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