KEGG   Kangiella profundi: CW740_05595
Entry
CW740_05595       CDS       T05254                                 
Symbol
ligA
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kpd  Kangiella profundi
Pathway
kpd03030  DNA replication
kpd03410  Base excision repair
kpd03420  Nucleotide excision repair
kpd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CW740_05595 (ligA)
   03410 Base excision repair
    CW740_05595 (ligA)
   03420 Nucleotide excision repair
    CW740_05595 (ligA)
   03430 Mismatch repair
    CW740_05595 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpd03032]
    CW740_05595 (ligA)
   03400 DNA repair and recombination proteins [BR:kpd03400]
    CW740_05595 (ligA)
Enzymes [BR:kpd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CW740_05595 (ligA)
DNA replication proteins [BR:kpd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CW740_05595 (ligA)
DNA repair and recombination proteins [BR:kpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CW740_05595 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CW740_05595 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     CW740_05595 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CW740_05595 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT RNA_pol_A_CTD 5_3_exonuc RNA_ligase
Other DBs
NCBI-ProteinID: AUD78752
UniProt: A0A2K9AMB1
Position
1195451..1197466
AA seq 671 aa
MSHKKSEIEKRVAELRATLDNYNYQYYVLDNPTVPDAEYDRLLRELQQLEKEHPEVVSSD
SPTQRVGAKPDNGFEEVIHELPMLSLDNAMSDEELISFDKRIKDRLKSSTEIEYVCEPKL
DGLAVSLLYENGQLVRGATRGDGTTGENITLNVRTIRAIPLKLRGEHIPERIEIRGEVFM
PKSVFESLNDEAREQGGKTFANPRNAAAGSLRQLDPSITAKRKLSFYAYSMGLVSDDYEL
ADSHYGRLQQIKTLGLPVSEEVKVVKGADGCQHYHQSILQKRDKLAYEIDGVVNKVNSIA
LQEELGFVARAPRWAIAHKFPAQEEMTQLLGVDFQVGRTGALTPVARLEPVSVGGVTVSN
ATLHNMDEIARLDARIGDTVIIRRAGDVIPQVVSVILEKRPSDAEEILTPTNCPVCDSPV
ERTEGEAVIRCTGGLICSAQRNESIKHFASRKAMDIDGLGDKLVEIFAEKEMIKTISDLY
RLKASDIAALDRMGEKSAENLINALEQSKSTTLPKFLYSLGIREVGEVTAKNIANHFCSL
DGIIAASQEELESVPDVGPIVAHHIRAFFDNEENIEQINELKQLGVNWPDIEKKSDEELP
LKGKTYVITGTLEGISRSEAKSKLEALGAKVSGSVSSKTTALIAGASAGSKLKKAQELGV
EVLDQSFLNNL
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgagtcacaaaaagtctgagatagaaaagcgcgtagctgagttacgcgctaccctcgat
aattataattaccaatattacgttttagataacccaacagttcccgatgccgaatatgat
cgcttacttcgtgagttacaacagttagagaaagagcatccagaagttgtgtcatcagat
tcgccaacccagcgtgttggcgcaaaaccagacaatggttttgaggaagtgattcatgaa
ttacccatgttgtctcttgataatgccatgtctgatgaggaactgataagcttcgacaag
cggattaaagaccgattaaagtcatccactgaaattgagtatgtctgcgaacctaaactg
gatggtctagcagtaagtttattgtatgaaaatggacagttggtccggggcgcaactcga
ggtgatggaacgactggtgaaaacattacattaaacgtcagaaccattcgagctattccg
ttgaagttacggggtgagcatatccctgagaggattgaaatacgtggtgaagtgttcatg
cctaaatcggtattcgagtctctcaatgatgaagccagagagcaggggggtaaaaccttc
gctaaccctcgtaatgcagcggcaggcagtctacgtcagttagatccatcaattacggca
aaacgaaagctatcattttatgcctactcaatgggcctggtctctgatgattatgaatta
gcggattctcattacggtcggttgcaacaaatcaaaacattgggtttacctgttagtgaa
gaagtcaaagtcgtcaaaggtgcagacggttgtcagcattaccatcagtcgatattacaa
aaacgagataagttggcatacgaaattgatggggtggtaaataaagtcaattctatagca
ttgcaggaagagctgggctttgtcgctcgcgctcctcgctgggcaattgcccataaattt
ccagcacaggaagaaatgactcagttgctgggtgttgatttccaagtaggacgtaccggt
gcattaacgcccgttgcaagacttgagccagtatccgttggaggcgttaccgttagtaac
gctactctgcataatatggacgaaatcgcacgacttgatgctcgtattggcgatacagtt
attattcgacgcgccggagatgtaattccacaagttgtcagcgttattcttgaaaagcgc
ccatctgatgccgaagaaattttaacgcctaccaattgtccggtctgtgactcacccgtt
gaaagaaccgaaggcgaagctgttattcgatgtactggtggacttatatgttccgcgcaa
cgtaatgaatccattaaacattttgcctcacgtaaagccatggatattgatggtctcgga
gataagctggtagagatttttgctgagaaggagatgattaaaacaatcagtgatctctat
cgattaaaggccagtgatattgctgctcttgatcgcatgggggaaaagtcagcggagaat
ctgattaacgctttagagcagagtaaaagtaccactttaccaaagtttttatactcccta
ggtattcgcgaagttggcgaggttactgctaaaaatattgctaatcatttttgttctttg
gatggaattattgcagccagtcaggaagaacttgagtctgtgccagatgtcggtcctatt
gtcgcgcatcacattcgcgccttttttgataatgaagaaaatattgagcaaatcaatgaa
ttgaaacagttgggtgttaactggcccgatatcgaaaagaaatctgatgaagaattacca
ctgaaaggcaagacttatgttattacgggtactctagaaggcatcagtcgaagcgaagca
aaatcaaaacttgaagcattgggagccaaggtttcaggttccgtttccagtaaaactaca
gccttaatcgcaggtgcgagtgcagggagtaaattaaaaaaggcgcaggaactgggtgtt
gaagttctagaccagtcgttccttaataatctttag

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