KEGG   Kosmotoga pacifica: IX53_08985
Entry
IX53_08985        CDS       T03949                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K07456  DNA mismatch repair protein MutS2
Organism
kpf  Kosmotoga pacifica
Pathway
kpf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    IX53_08985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kpf03400]
    IX53_08985
DNA repair and recombination proteins [BR:kpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     IX53_08985
SSDB
Motif
Pfam: MutS_V Smr MSSS Exonuc_VII_L AAA_23 Seryl_tRNA_N
Other DBs
NCBI-ProteinID: AKI97932
UniProt: A0A0G2Z8M7
Position
1904144..1906453
AA seq 769 aa
MSSQKLTELKRVIEFDKVLSKIAHYCFTEYGKEALNTLHPFGTEYHSRLERSRELYELIL
RFGEPPLYGIHDLREEIQQALGGVILNGTQLKKASQTLMAICRIRDFFSKHTERVPKLWQ
LLSPLNCEKSFINAVEKALNDEGDVVDNASPLLREIRNELRQLNRGLRSKLESIVSTYRN
ELTDSVILTREGRYVLPLIASRKALYEGIIHGSSSSGATVYFEPKELIPLNNRLRMLKSS
EEEEVRRILRDLTTKFIGLIERLKANFSIISELDISYASVIYAKRHRGSFVFPVNDKNMA
LLKARHPLIDDDKVVPIDFTMPEEVGAVVITGPNTGGKTVALKTIGLCVLMALSGLPVLA
DESSKIPKFNAVYVDIGDEQSIEQSLSTFSSHMSKIIGIIDDCNEDSLVLLDELGAGTDP
VEGAALSMAIIDALLNKRVKAVVSTHLSPLKVYALNKPEVMNASVEFDVDTLKPTYHLIM
GIPGSSNALEISRRLGLSFEVLAKARKYMSDESSRFENLISELHRERSKIEIVKRELIQE
RQKLNALKKEYSERLEKIKKKRLGEIDEELRKLEEKLNASIKEMEKAINLARSGKELDRV
KAVKDLYRVKSMLRTIPDHTPRSDTAVKPGDSVKIAETGVIARVVSIKEGKALLEAGKLS
LEAPVKRLEKVENKEEANKFSYSLASSEKAFSDEVDIRGMTTEDVPFVLDDFLDSLTRSG
RTRGYIIHGKGTGRLAEAVWQYLRRNRSVKRFRIGTPKEGGHGVTVIEV
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgtcttcacaaaaattaactgaattgaaaagagtaatagagtttgataaagtactgagc
aaaatagctcactattgttttactgaatatggaaaagaggctctaaacactctgcatcca
tttggcaccgaatatcattcaagacttgaacgtagcagagagctgtacgaattgatctta
agattcggtgaaccaccattgtacggcattcatgacctcagagaagaaatacaacaagct
cttggcggggtaattttgaacggaactcagttgaaaaaggcgagccagacactcatggca
atatgtcgcatcagggacttcttttctaagcatacggaaagagttccgaagctctggcaa
cttctcagtcctcttaactgcgaaaagagtttcatcaacgctgttgagaaggcccttaac
gatgaaggagatgtcgttgacaatgcaagcccattgttaagagaaattagaaatgaattg
agacaactgaatagaggactgcgatcaaagctggagtccatagtttcaacataccgcaat
gaactcactgattccgttatactcaccagagagggacgatatgtactcccacttatagct
agcagaaaagctctatacgagggaatcatccatggcagttccagcagcggtgctacggtt
tattttgagccgaaggaattaatacccttgaataacaggttacggatgttgaaatcttca
gaagaggaagaggttcgccggatattaagagacctgacgacaaaatttattggactgata
gagcgactaaaggctaattttagtataatatctgaactcgatataagttacgcttcggtt
atttacgcaaaaaggcaccgggggagtttcgtttttcctgtaaacgataaaaacatggcg
ctgttgaaggccagacatcccttgattgatgatgacaaggtcgttcccatagacttcaca
atgcctgaagaagtgggagcagttgttataaccgggccaaacacaggcggaaaaacggtg
gcattaaaaaccataggcctttgtgtacttatggccttaagcggccttcccgttcttgca
gatgaatcttcgaagattcccaaattcaacgctgtatatgttgacattggcgatgagcag
tcgatagaacagagtctgagcacgttttcatcacatatgtcgaagataatcggaataata
gacgattgtaatgaagactctctcgtgctactggatgaactgggggccggcaccgacccg
gtagaaggagcggctttgtcgatggcgatcatagatgcacttctgaataaaagagtaaag
gcagttgtgagcacccatttgagtcccctaaaagtgtatgcattgaataagcctgaagtt
atgaatgccagtgtagaattcgacgtggatacgttaaaacccacttaccatctcataatg
ggcatacctggtagttccaatgccctggagatttcacgtcgccttggcctctcgtttgaa
gttcttgctaaggcgaggaagtacatgtcagatgaatcctcgcggtttgagaatttaatt
agcgaattacacagagaacgttcaaaaatcgagattgttaagagagaactcatccaggaa
aggcagaagctgaatgcccttaagaaagaatacagcgagcgtcttgagaaaataaagaaa
aaaaggcttggtgaaattgatgaagaactcaggaagctggaagaaaagttgaacgcctct
attaaggaaatggagaaagcgataaacctggctcgctcgggcaaagagctggatagggta
aaagccgttaaagacctgtacagggtaaaatcgatgttgcgtactatacctgatcacact
ccccgcagtgatacagccgttaagccgggagatagcgtgaaaatagctgagacaggtgtg
atagcaagggtcgtttccataaaagaaggcaaggctttgttggaagcggggaaattatca
ctcgaagcccctgttaaaaggcttgaaaaagttgaaaacaaggaagaagcaaataagttc
agttattcgttggcctcgagcgagaaggcattcagcgatgaagtagacataagaggtatg
actactgaagatgtccccttcgttctcgatgattttctggattcactgaccagatctggt
cgaaccagaggctatatcattcacggtaaaggcacgggaaggcttgctgaggcggtttgg
caatatttgagacgaaataggtccgtgaagcgtttcagaattggtacaccaaaagaaggc
ggacatggtgttactgtgattgaggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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