KEGG T03368: A593

Klebsiella variicola KP5-1: A593_18505

Entry

A593_18505        CDS       T03368

Name

(GenBank) excinuclease ABC subunit B

K03702

excinuclease ABC subunit B

Organism

kpk Klebsiella variicola KP5-1

Pathway

kpk03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:kpk00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A593_18505
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kpk03400]
    A593_18505
DNA repair and recombination proteins [BR:kpk03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A593_18505
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A593_18505

SSDB

Motif

Pfam:

UvrB_inter UvrB Helicase_C ResIII UVR DEAD UB2H AAA_30 SBDS_domain_II Helicase_C_2 AAA_22 DUF3848 IF2_N

Other DBs

NCBI-ProteinID:

AIE02420

Position

3861241..3863262

AA seq 673 aa
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVESTVPR
YTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNIDGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLG
QGLAKTKAKGRGKAKAVEPAGLSAVEMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS

NT seq 2022 nt +upstreamnt +downstreamnt
atgagtaaatcgtttgttctgcattccgcctttcgcccctccggagaccaaccggaagcc
atccgccgcctggaagaggggctggaggatgggctcgcgcatcaaacgctgctgggggtc
accggctccggtaaaaccttcaccatcgccaacgtgattgccgacctgcagcggccgacg
atggtgctggcgccaaacaaaaccctggcggcccagctctatggcgagatgaaagagttt
ttcccggagaatgccgtcgagtatttcgtctcctactacgattactatcagccggaagcc
tacgtccccagctcagataccttcattgagaaggacgcctcggtaaacgaacatatcgag
cagatgcgcttgtcggcgaccaaagcgctgctcgagcggcgcgacgtggtggtggtggcg
tcagtctcggctatctacggcctcggcgacccggacctgtacctgaagatgatgctgcac
ctgacggtcgggatgctgattgaccagcgcgctatcctgcgccgtctggccgagctgcag
tatacccgcaacgatcaggccttccagcgcggcacctttcgcgtgcgcggcgaggtgatc
gacgtcttcccggcggaatccgacgatatcgcgctgcgcattgagctgtttgatgaagag
gtcgagcgcctgtcgctgttcgacccgctgaccggccacgtggaatcgacggtgccgcgc
tacaccatttatcccaagacccactacgtgacgccgcgggaacgcatcgtccaggcgatg
gaagagatcaagctggagctggcggagcggcgcaaggttctgctggccaacaacaagctt
ctggaagagcagcgcttaacccagcgtacccagttcgacctcgaaatgatgaacgagctg
ggctactgctcgggcattgaaaactactcgcgcttcctttccggtcgcgggcccggcgag
ccgccgcccactctgtttgactatctgccggcagacggtctgctggtgatagacgaatcc
cacgttacggtgccgcagatcggcggtatgtaccggggcgaccgggcgcgcaaagagacg
ctggtggagtacggtttccgcctgccgtcggcgctggataaccggccgatgaagtttgaa
gaatttgaagcgctggccccgcaaaccatctatgtctcggcaacccccggcgcctacgag
ctggataaatccggcggcgaagtggtggatcaggtggtgcggccgaccggtctgcttgac
ccgatcatcgaagtgcggccggtagccacccaggtagacgatctgttgtcagagatccgc
ctgcgcacggccatcaacgagcgcgtgctggtgaccaccctcactaagcggatggcggag
gatttaaccgagtatcttgaggagcacggcgagcgggtgcgctatctgcactcggatatc
gacaccgtcgagcgcatggagattatccgcgacctgcgccttggcgagtttgacgtgctg
gtagggatcaacctgctgcgtgaggggctggatatgccggaggtgtcgctggtggcgatc
ctggatgccgacaaagagggcttcctgcgctccgaacgctcgcttatccagaccatcggc
cgcgcggcgcgaaacatcgacggcaaggccatcctttacggcgataagatcaccccttcc
atggccaaagccattggcgagaccgagcgtcgacgggagaaacagcagcgttataacgaa
gagcacggcatcgtaccgcagggcctcaacaagaaagtggtggatatcctgcagttgggc
cagggcctggcgaaaactaaagccaaagggcgcggtaaagcgaaggccgttgagcctgcc
gggcttagcgccgtggagatgacgccaaaagcgctgcagcagaagatccacgagctggaa
gggcagatgatgcagcacgcccagaacctcgagttcgaagaggcggcgcaaattcgcgac
cagttgcatcagctgcgcgagctgtttatcgcggcctcctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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