KEGG   Kosakonia radicincitans: A3780_04870
Entry
A3780_04870       CDS       T04579                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
krd  Kosakonia radicincitans
Pathway
krd03030  DNA replication
krd03430  Mismatch repair
krd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:krd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3780_04870
   03430 Mismatch repair
    A3780_04870
   03440 Homologous recombination
    A3780_04870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:krd03032]
    A3780_04870
   03400 DNA repair and recombination proteins [BR:krd03400]
    A3780_04870
Enzymes [BR:krd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A3780_04870
DNA replication proteins [BR:krd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A3780_04870
DNA repair and recombination proteins [BR:krd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A3780_04870
SSDB
Motif
Pfam: DNA_pol3_tau_5 DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_4 AAA RuvB_N AAA_22 AAA_5 AAA_16 DNA_pol3_delta ResIII AAA_14 AAA_18 AAA_2 AAA_30 AAA_assoc_2 PIF1 AAA_7 TsaE AAA_19 Mg_chelatase nSTAND3
Other DBs
NCBI-ProteinID: APG16925
Position
1060830..1062770
AA seq 646 aa
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSSGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDTCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRSQLEHILTDEKIEHEPRALQLLARAADGSLRDALSLTDQAIASGNGQLSAAVVSSM
LGTLNDDQALSLVEAVVAADGERAMGLVNEAASRGVEWEALLLEMQTLLHRIAMVQLTPA
ALGSDMAPIEQRLRELARTVPPTDVQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRAPLPAPEVPQQSFAPVAPTAVMSPQQVPPAPQSQPSAAPVQNDAPLPESTSSVLAARR
QLQRAQGADKAKKSEPAAATRARPVSNAALERLASVTERVQSRPAPSALEQAPAKKEAYR
WKATTVVTETKEVVATPKALKKALEHEKTPELAKKLAEEAIERDAWAKEVSQLKLPKLVE
QVALNAWKEQEGDRWCLHLRSSQRHLNSQGAQKALSDALSELHGSTVELTIIEDDNPAVR
TPLEWRQAIYEEKLAQAREAIIADSNIQTLQRFFDADLDEESIRPL
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgagttatcaggtcttagcccgaaaatggcgaccgcaaacttttgctgacgtcgtcggc
caggagcatgtgctgaccgcactggcgaacggcttatcatcaggacgcattcatcatgcg
tatctgttctccggcacccgcggcgtcggcaaaacctctatcgcccgtctgctggcgaag
gggctgaactgcgaaaccggcatcaccgcaacgccgtgcggcgtgtgtgatacctgccgc
gaaattgagcagggccgctttgtcgatttaattgagatcgacgccgcgtcgcgtaccaaa
gtcgaagatacccgcgatctgctggataacgtgcagtacgccccggcgcgcgggcgtttc
aaagtctatctgattgacgaagtgcatatgctctcgcgtcacagctttaacgcgctgttg
aaaacgcttgaagagccgcctgagcacgtcaaattcctgctggcgaccaccgatccgcaa
aaactgccggtgaccattctttcccgttgccttcagttccacctgaaagcactggatgtt
gaacagatccgcagtcagcttgagcacattcttactgacgagaagattgaacatgaaccc
cgtgcgctgcaactgctggcgcgtgcggctgacggcagcctgcgcgatgcgctgagcctg
accgatcaggcgattgccagcggcaacgggcagctctctgcggcggtggtcagctccatg
cttggcacgctgaatgacgaccaggcgctttcattagttgaagcggtggttgccgctgac
ggtgaacgcgctatggggctggtgaacgaggctgcatcgcgcggcgtcgaatgggaagcc
ttactgctggagatgcaaacgctgctgcatcgtatcgccatggtacagctgacgcctgcg
gcgctcggcagcgacatggccccgattgaacagcgtctgcgtgaactggcccgcaccgtg
ccacccaccgatgtgcagctttactatcagacgctgctgattggccgtaaagaactgcct
tatgcgccggaccgccgcatgggcgttgaaatgacgctgctgcgtgcgctggcattccat
ccgcgtgcgccattaccggcgccagaagtgcctcagcaatccttcgctcccgtggcgccc
accgccgtgatgtcgccgcagcaggttccgcccgcgccgcagtctcaaccgtcggcggca
ccagtgcagaacgacgcaccgctgcccgaatcaaccagctcggtgctggcggcgcgcagg
caactgcaacgcgctcagggagcagacaaagcaaaaaagagtgaaccggcagccgcaacc
cgcgcacggccggtgagtaatgccgcgctggagcgcctggcttcggtcaccgagcgcgtg
cagtcgcgcccggcgccttcggcgctggaacaggctccagccaaaaaagaggcctaccgc
tggaaagcaaccactgttgtcaccgagacaaaagaggttgttgccacgcccaaggcgctg
aaaaaggcgctggaacacgagaaaacgccggagctggcgaaaaagctggcggaagaggcg
attgaacgtgatgcctgggcgaaagaggtcagccagctaaaattgccgaaactggttgag
caggtggcgctgaatgcctggaaagagcaggagggcgatcgctggtgtctgcatctgcgc
agctcgcagcgtcacctgaattcgcagggcgcacagaaggcgcttagcgacgcgcttagc
gaattgcacggttcgacggttgaactgactatcattgaagatgataatccggcagtgcgt
acgccgctggagtggcgtcaggcaatctatgaggaaaagctcgcgcaggcgcgtgaggca
attattgcggatagcaacattcagacgctgcaacggtttttcgatgcggatctggatgaa
gagagtattcgtcccctttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

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