KEGG   Kosakonia sacchari: C813_09930
Entry
C813_09930        CDS       T03601                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
ksa  Kosakonia sacchari
Pathway
ksa00730  Thiamine metabolism
ksa01100  Metabolic pathways
ksa01240  Biosynthesis of cofactors
ksa04122  Sulfur relay system
Module
ksa_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:ksa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    C813_09930
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    C813_09930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ksa03016]
    C813_09930
Enzymes [BR:ksa01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     C813_09930
Transfer RNA biogenesis [BR:ksa03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    C813_09930
SSDB
Motif
Pfam: ThiI THUMP QueC Diphthami_syn_2 Rhodanese tRNA_Me_trans
Other DBs
NCBI-ProteinID: AHJ75009
Position
complement(3745206..3746654)
AA seq 482 aa
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKQYDETLAVVRHWDHIEVRAKDESQR
LAIRDALTRIPGIHHILEVEDVPFTSLHDIFEKALVQYREQIEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHVESARVKLTHPDVTVNLEIEDDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEEHFDFSILDNVVAEASNIDIREIAQQTQETVVEVETVTGFGPNDVILDIRSIDEQD
DKPLKLEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFANVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattttgaccgggaacattcgtaacgttctgaagcaatacgacgagacc
ctcgccgttgtccgccactgggatcatattgaagtgcgcgccaaagatgaaagtcagcgc
ctggctatccgcgacgcgttgacccgtattccgggcatccatcatattctcgaagtggaa
gatgttcctttcacctcgctgcacgatatttttgagaaagcgctggtgcagtaccgcgag
cagatcgaaggtaaaaccttctgcgtacgcgttaaacgtcgcggtaagcatgagtttagc
tcgattgaagttgaacgttatgttggcggtggtctgaaccagcatgtcgaatcggcgcgc
gtcaaactgactcacccggatgtaacggtgaacctggagatcgaagacgatcgcctgctg
ttagtgaaaggtcgctatgaaggtatcggcggtttcccgatcggcacccaggaagatgtg
ctgtcgcttatctccggcggtttcgactctggcgtttccagctatatgttgatgcgccgc
ggttgccgcgtacactactgcttctttaacttgggcggcgcagcacatgaaattggtgtt
cgccaggtcgcacactatttgtggaaccgttttggtagctcccaccgcgtgcgttttgtg
gcgatcaactttgagccagtggttggtgaaatcctcgaaaaagtggatgacggccagatg
ggcgtggtgttgaaacgcatgatggtgcgcgcagcgtcaaaagtggctgaacgctacggc
gtgcaagcgctggtgactggtgaagcactgggccaggtttccagccagacgctgaccaac
ctgcgtttgattgacaacgtttctgacacgctgattttgcgtccgcttatctcttacgat
aaagagcacatcattgacctggcgcgtgaaatcggtactgaagatttcgcccgtaccatg
ccggaatattgcggagtgatctcgaaaagcccaaccgttaaagcggtgaaggcgaagatc
gaagcggaagaggagcattttgacttctccattctcgataacgtggttgctgaagcgagc
aatatcgatatccgcgaaattgcccagcagacccaggaaacggtggtcgaagtcgaaacg
gtaaccggttttggcccgaacgatgtgatcctggatatccgttctattgatgaacaggat
gacaaaccgttgaagctggaagggatcgacgtggtttcgctgccgttctataaactgagt
accaagtttggcgacctcgatcagaacaaaacctggcttttgtggtgcgaacgcggcgtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttgccaacgttaaagtttat
cgcccataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system