KEGG   Kangiella sediminilitoris: KS2013_4
Entry
KS2013_4          CDS       T04467                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ksd  Kangiella sediminilitoris
Brite
KEGG Orthology (KO) [BR:ksd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ksd03032]
    KS2013_4
   03400 DNA repair and recombination proteins [BR:ksd03400]
    KS2013_4
Enzymes [BR:ksd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     KS2013_4
DNA replication proteins [BR:ksd03032]
 Prokaryotic type
  DNA Topoisomerases
   KS2013_4
DNA repair and recombination proteins [BR:ksd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KS2013_4
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AOE48736
UniProt: A0A1B3B7G9
Position
4231..6657
AA seq 808 aa
MSENNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSE
ITVVIHDDNSVSVRDDGRGIPTEIHEEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSDELTLIIRRAGKRHEQVYHLGVPEKPLEVVGDSQSTGTELRFRPSTEIFSD
IEFKYDILAKRLRELSFLNSGVSIKLSDERSGKSDHFKYEGGIQAFVEFLNHNKTPIHEK
VFHFTSEREEDGITVEVAMQWNDGFQESIFCFTNNIPQRDGGTHLAGFRAALTRGLNTFM
ENEGYNKKGKVSTTGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQAMGEYL
KEFLLENPNEAKSVVNKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL
SELYIVEGDSAGGSAKQGRDRKNQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG
IGREEFDPDKTRYHSIIIMTDADVDGAHIRTLLLTFFYRQVPELIERGYVYIAQPPLYKV
KKGKQETYLKDDEALEGYLTNLALNNTQLFTSKDAPPISGDRLETLVNEYREVKKTIIRV
SRRLPREMLDKLIYHKTLSAEDMKDETKVKEWTTVLEEKLNVDRTSGAHRYEFSVRKDNE
LNLFYPHLIMYHHGVESEYLLSKEFFVSEDYKKISLLGEQLESLIEEGAFVKRGEKIQEV
ETFSEVLTWLMDEARKGQSIQRYKGLGEMNPEQLWETTMDPETRRMLQVTIEDAVAADQL
FTTLMGDHVEPRREFIESNALSVSNLDI
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgtcggaaaataacaattacgattcgtcgagtattaaagtcttaaaaggacttgatgct
gttcgtaaacgccctggtatgtatattggtgatacagatgatggtacaggccttcaccat
atggtatttgaggtcgtagataactctatcgatgaagcgttggcgggtcattgttcagaa
atcacagtcgtaatacatgatgataactctgtatccgtccgtgatgatggtcgtggaatt
ccaacggaaattcatgaagaggaaggggtttctgcagcagaagttattctgaccgtatta
catgctggcggtaaatttgacgataactcttataaagtgtcgggcggcctgcatggtgta
ggtgtttcagtggttaacgctttgtctgacgagttaacactgataattcgtcgcgcaggt
aagcgacatgagcaggtatatcatttaggtgtacccgaaaaaccattagaagttgttggt
gatagccagtctacaggtacagaattacgctttagaccaagtacagagatattcagcgat
atcgagtttaaatatgacatcctggctaaacggctgagagagttatcatttttaaactct
ggcgtgagtataaaactgtcagatgagcgtagtggtaagtcggaccattttaaatacgaa
ggcggaatacaagcctttgtagagttccttaatcataataaaacgccaattcatgagaag
gtattccactttacatcagaacgtgaggaagatggaattactgttgaagtggcaatgcaa
tggaatgatggattccaggaaagcattttttgctttaccaacaatatccctcaaagagat
ggtggtacacaccttgcgggcttccgggctgcgttaacccgaggcctgaatacctttatg
gaaaatgaaggatataacaaaaaaggcaaggtaagcacaacgggcgatgatgctcgagag
ggtttaactgcagtagtttctgtaaaagtcccagaccctaagtttagctcacagactaaa
gataaactggtatcgagtgaagttaaaagtgctgtagagcaggcgatgggtgaatatctg
aaagaatttctgctagagaacccgaatgaggcaaaatctgttgtaaataagatgatagac
gctgcccgtgcaagggaagctgctagaaaagcgcgtgaaatgactcgaagaaagggtgct
ttagatattgctggtttgccgggcaagctggctgactgtcaggaaaaagatcctgcatta
tctgaactgtacattgtggagggtgactctgcgggcggttctgctaaacagggacgagat
cgcaaaaaccaggccattcttccgctgaaaggtaagattctaaacgtagaaaaagcacga
tttgacaaaatgttatcctcgcaggaagtaggtacattgattacagcgttgggttgcggt
attggccgagaggaatttgatccggataaaacgcgttatcatagtattattattatgact
gacgccgatgttgatggtgctcatatccgtaccttattgttgaccttcttctatcgccaa
gtaccagagttaatcgaacggggatatgtctatattgctcagccgcctttatacaaggtt
aagaaaggtaagcaggaaacctatttaaaagatgatgaagctctggaaggttacttaaca
aatcttgccttgaataatacgcaactctttaccagtaaagacgctccaccaatttcgggt
gatcgtttagaaacgctagtgaatgagtatcgtgaagttaaaaaaacaattatcagagta
tcaaggcggcttccaagggagatgcttgataagctgatatatcataaaactctatccgca
gaagacatgaaagatgagaccaaggttaaagagtggacaacggttctcgaagaaaaacta
aatgttgatagaactagcggagcgcatcgttatgagttttctgttagaaaagataacgaa
ctgaatcttttctacccccacttgataatgtatcaccatggcgttgaaagtgagtactta
ctttcgaaagaattcttcgtttctgaagactataagaaaattagcttattaggtgagcaa
cttgagagcttaattgaagaaggtgctttcgttaagcggggtgagaaaatacaggaggtt
gaaaccttcagtgaagttctaacatggttaatggatgaggccagaaaagggcagtcgatt
cagcgctataaaggactaggtgagatgaacccagagcagctatgggagacgacaatggat
cctgagacacgacgaatgctgcaggtcacaattgaagatgcggtggccgcggatcagttg
tttacaacccttatgggcgatcatgttgagccacgccgtgaatttattgaaagcaatgcg
ttatcagtatcaaacctggatatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system