KEGG T00974: Ksed

Kytococcus sedentarius: Ksed_15620

Entry

Ksed_15620 CDS T00974

Definition

DNA polymerase LigD, polymerase domain

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

kse Kytococcus sedentarius

Pathway

kse03410	Base excision repair
kse03420	Nucleotide excision repair
kse03430	Mismatch repair
kse03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:kse03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:kse03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:kse03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:kse03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

256825382

NCBI-GeneID:

8373068

UniProt:

C7NI70

Position

complement(1598971..1600032)

AA seq 353 aa
MASKATTLEVPGPDGQVRSLRLSSPDRVMCPAGDQPGSTDVTKLDLAEYLVAVAGRFLEA
NADRPVTLQRFPTGILGEEFYSKNPPKGAPDFLRTTTCTYPSGRSHEQVVLDEIGAAVWA
AQMSTLTFHPWPVRTSDHSGELLNDCPDQVRLDLDPMPGRGFADVVTIARAARDLLDELG
LTAYVKTSGNRGLHVFAAIEPQAEFLDVRHGVIAIARELERRLPELVTTRWWKEERGDKC
FIDFNQHCRDRTLAGAWSPRALPGAPVSLPVAWDRLDGVTPGEVVIPTIADHLAEPDPWA
GMLEHRASFSRAMDLWQADLERGLGEEPFPPDHPKMPGEPPRVQPSRARAQST

NT seq 1062 nt +upstreamnt +downstreamnt
atggccagcaaggcaaccaccctcgaggtccccggtcccgacgggcaggtccgttccctc
cgcctctctagtcccgaccgggtgatgtgccccgccggtgaccaaccggggtccacggac
gtcacgaagctggacctcgccgagtacctcgtcgcggtggccggccgcttcctcgaggcg
aatgccgaccggccggtcaccctgcagcgcttccccacgggcatcttgggggaggagttc
tactcgaagaacccgcccaagggcgcgccggacttcctgcgcaccaccacctgcacctac
ccgagcgggcgctcgcacgagcaggtggtcctcgacgagatcggggctgccgtgtgggcc
gcccagatgtccacgctgaccttccacccctggccggtgcggacgagtgaccactccggg
gagctgctcaacgactgccccgatcaggtgcgcctcgacctggacccgatgccggggcga
ggcttcgccgacgtggtcaccatcgcccgtgcggcccgggacctgctcgacgagctgggt
ctgaccgcctacgtgaagacctccggcaaccggggcctgcacgtgttcgccgccatcgag
ccgcaggccgagttcctggacgtgcgccacggggtgatcgccatcgcccgcgagctcgag
cggcgcctcccggagctcgtgaccacccgctggtggaaggaggagcgcggtgacaagtgc
ttcatcgacttcaaccagcactgtcgcgatcgcaccctggccggcgcctggagcccccgc
gccctgcccggggctccggtctcgctcccggtcgcctgggaccgcctcgatggcgtgacc
ccgggcgaggtcgtcatccccaccatcgccgaccacctggccgagcccgacccctgggcg
ggcatgctcgagcaccgggcctcgttcagccgggccatggacctgtggcaggccgacctc
gagcgcggactgggggaggagccgttcccgccggaccacccgaaaatgccgggtgaacca
ccccgggtgcagccctcgcgggcacgagcccagagcacctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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