KEGG   Kitasatospora setae: KSE_20040
Entry
KSE_20040         CDS       T01648                                 
Name
(GenBank) putative exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ksk  Kitasatospora setae
Pathway
ksk03030  DNA replication
ksk03430  Mismatch repair
ksk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ksk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KSE_20040
   03430 Mismatch repair
    KSE_20040
   03440 Homologous recombination
    KSE_20040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ksk03032]
    KSE_20040
   03400 DNA repair and recombination proteins [BR:ksk03400]
    KSE_20040
Enzymes [BR:ksk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KSE_20040
DNA replication proteins [BR:ksk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KSE_20040
DNA repair and recombination proteins [BR:ksk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KSE_20040
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C
Other DBs
NCBI-ProteinID: BAJ27827
NITE: KSE_20040
UniProt: E4N9E6
Position
complement(2225797..2226504)
AA seq 235 aa
MTWWKGPLTGFDLETTGTDPEESRIVTAAVVDTLGGGVQGATTWLLDPGVPIPDEAAAIH
GITDAEARANGRPAAEAIEEIARTLAERLAAGRPVVAFNAPFDLSLLDAELRRHGLPTLA
DRLGGPVAPVVDAMVVDRALDKYRKGSRTLQRVCEVYGVELRDAHEAGSDALAAVRVAVA
LGHRYPAQAGDLPLDELHRRQVDWHRDWAAGLQSWLRRKDPAAVVDPRWPLKAAS
NT seq 708 nt   +upstreamnt  +downstreamnt
atgacctggtggaaggggccgctcaccggtttcgacctggagaccaccggcaccgacccg
gaggagtcccggatcgtcaccgccgccgtggtcgacaccctcggcggcggcgtgcagggc
gccaccacctggctgctcgacccgggcgtcccgataccggacgaggccgccgcgatccac
ggcatcaccgacgccgaggcccgcgcgaacggccgccccgccgccgaggcgatcgaggag
atcgcccgcacgctggccgaacggctcgccgccgggcgccccgtggtcgccttcaacgcc
ccgttcgacctctcgctgctcgacgccgaactgcgccgccacggcctgcccacgctcgcc
gaccgcctcggcggcccggtcgccccggtggtcgacgcgatggtcgtcgaccgcgcgctg
gacaagtaccgcaagggctcgcgcaccctgcagcgggtctgcgaggtctacggcgtcgaa
ctgcgcgacgcccacgaggccggcagcgacgcgctcgccgccgtccgggtcgccgtcgcc
ctcggccaccggtacccggcccaggccggcgacctcccgctggacgaactgcaccgccgc
caggtcgactggcaccgggactgggcggccggcctgcagagctggctgcgccgcaaggac
ccggcggccgtggtcgacccgcgctggccgctcaaggccgcgtcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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