KEGG   Klebsiella variicola At-22: Kvar_0125Help
Entry
Kvar_0125         CDS       T01170                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
kva  Klebsiella variicola At-22
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:kva00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Kvar_0125
Enzymes [BR:kva01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Kvar_0125
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Kvar_0125
DNA repair and recombination proteins [BR:kva03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Kvar_0125
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
Position
128612..129421
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL
LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKTL
EDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRICGTPVVGTKHAQRATFYCRQCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaggttgaaaccagccgccgcggcatcgagccgcacctggttggc
gcaactattctgcacgccattgtgcgcaatggacggctgcgctggccggtttccgaagag
atttatcgcctgagcgacgttccggtactcagcgtgcggcgtcgtgccaaatacctgctt
ctggaactgccggacggctggatcatcgtccatctcgggatgtcgggaagcctgcgtatc
ctgagcgaagagctaccggccgaaaaacacgatcacgttgacctggtcatgagtaatggc
aaggtgctgcgctataccgatccgcgccgctttggcgcctggctgtggaccaaaacgctg
gaagaccatccggtactggcccaccttggcccggagccgctcagcgatgaatttaacgcc
gactatcttcagcagaaatgcgcgaagaaaaaaactgcgatcaaaccctggctgatggat
aacaagctggtggtaggggtcggcaatatctacgccagcgagtcgctgttctcggccggg
atccatcccgacaggttggcttcttcactgtcgcgggaagagtgtgagcagctggtgaaa
gtgattaagctggtcctgctgcgttcgatagagcagggcggcaccacgctgaaggatttc
ctgcaaagcgatggcaagccgggctattttgcccaggagctgcaggtctatggccgcaag
ggcgaaccgtgccggatctgcggcacgccggttgtcgggaccaaacatgcccagcgggcg
accttttattgccgtcagtgccagaagtag

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