KEGG   Klebsiella variicola At-22: Kvar_4920
Entry
Kvar_4920         CDS       T01170                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
kva  Klebsiella variicola At-22
Pathway
kva03420  Nucleotide excision repair
kva03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Kvar_4920
   03430 Mismatch repair
    Kvar_4920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kva03400]
    Kvar_4920
Enzymes [BR:kva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Kvar_4920
DNA repair and recombination proteins [BR:kva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Kvar_4920
   MMR (mismatch excision repair)
    Other MMR factors
     Kvar_4920
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22
Other DBs
NCBI-ProteinID: ADC60791
Position
complement(5248431..5250593)
AA seq 720 aa
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKEKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRAMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPQECVEEVRLRATVSRPVNHQRLG
APIAESDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgaagccgtagcggcc
tcgcgcaccaatatgctggttctggcaggggcgggcagtggtaagacgcgcgttctggtg
caccgtatcgcctggctgctgagcgtggagaactgctcgccgtactcgattatggcggtg
acctttaccaacaaagcggcggcggagatgcgccaccgtatcggccagctgatgggcact
acccagggcggcatgtgggtaggcaccttccacggcctcgcgcaccgtctgctgcgtgcg
catcatctggacgccaacctgccgcaggatttccaaatcctcgacagcgaagaccagctc
cgtctgctgaagcgtctgattaaggcgatgaatctcgatgagaagcaatggccgccgcgt
caggcaatgtggtacatcaacagccagaaagatgaagggctgcgccctcatcacattcag
agctatggcaacccggtcgagcagacctggcagaaggtctatcaggcctaccaggaggcc
tgcgaccgcgccggactggtggatttcgccgagctgctgctgcgcgcgcacgagctgtgg
ctgaacaagccgcatatcctgcagcactatcgtgagcgtttcaccaatatcctcgtcgat
gaattccaggacaccaacaacatccagtacgcctggatccgcctgctggccggtgatacc
ggcaaagtgatgatcgttggcgatgatgaccagtcgatttatggctggcgcggcgcgcag
gtcgagaacattcagcgcttcctcaacgacttccccggcgcggaaactattcgcctggag
cagaactatcgttcaaccagcaatattcttagcgctgccaacgccctgattgaaaacaac
aacgggcgcctgggcaaaaagctgtggaccgacggcgccgacggcgagccgatttcgctg
tactgcgccttcaacgatctcgacgaagcgcgcttcgtggtgaaccgcattaaaacctgg
caggagaacggcggcgcgctggagcaatgtgccattctctatcgcagtaacgcccagtcg
cgcgtgctggaagaggcgctcctgcaggccagcatgccgtaccgtatctacggcggtatg
cgcttcttcgaacgtcaggaaatcaaagatgcgctctcttacctgcgcctgattgccaac
cgtaacgacgatgcagcgtttgagcgggtggtcaatacgccgactcgcggcatcggcgat
cgtacgctcgacgtggtgcgccagacgtcgcgcgatcgtcagctgacgctgtggcaggcc
tgccgcgagctactgaaagagaaagtgctggctggccgtgccgccagcgctctgcagcgc
tttatggagttgattgacgcgctggcgcaggaaaccgccgatatgccgctacatgttcag
accgatcgggtgattaaagactccgggctgcgcgcgatgtacgagcaggagaaaggcgag
aagggccagacccgtattgaaaacttagaggaactggtgacggcgacgcgccagttcagc
tacaacgaagaagatgaagacctgatgccgctgcaggcgttcctctcccacgccgcgctg
gaagcgggcgaggggcaggcggacacctggcaggacgcggttcaactgatgaccctgcac
tcggcgaaagggctggaattcccgcaggtgtttatcgtcggcgtcgaagaagggatgttc
ccgagccagatggcgcttgatgaaggcggccgcctggaagaagagcgtcgcctggcctac
gttggcgtgacgcgcgccatgcagaagctgacgctgacctacgccgaaacccgccgtctg
tacggcaaagaggtttaccatcgcccgtcgcgctttattggagaactgccgcaggagtgc
gtagaagaagtgcgtctgcgggccacggtgagccgtccggtaaaccaccagcgactgggg
gcgccgattgccgagagcgataccggctacaagttaggtcagcgggtgcgtcatccgaag
tttggcgaaggcactatcgtcaacctcgaaggcagcggcgagcacagccggctgcaggtg
gcttttcagggccagggaatcaaatggctggtggcggcttacgcgcggcttgagacggtg
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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