KEGG   Candidatus Liberibacter asiaticus gxpsy: WSI_01910
Entry
WSI_01910         CDS       T02506                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
laa  Candidatus Liberibacter asiaticus gxpsy
Pathway
laa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:laa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WSI_01910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:laa03021]
    WSI_01910
   03019 Messenger RNA biogenesis [BR:laa03019]
    WSI_01910
Transcription machinery [BR:laa03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     WSI_01910
Messenger RNA biogenesis [BR:laa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     WSI_01910
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT Spore_III_AA AAA_25 AAA ANAPC4_WD40 AAA_22
Other DBs
NCBI-ProteinID: AGH16752
Position
429770..431032
AA seq 420 aa
MKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEVLQD
GFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAIN
FDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPP
RTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHV
QVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRF
FGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDI
IKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMNKQN
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaagctccaagagcttaaaaataagtctccaaccaaacttcttgcttttgctgaatca
cttgaaatagaaaatgctaatgttatgcgaaagcaagaacttatgttttctatattaaaa
gttttatctggtcgagatgtggaaattataggggaaggagttattgaagttcttcaagat
ggttttggttttttacgctctcctgatgctaactatttagctggtccagatgatatttat
gtttctccttctcaaattaaaagtttttctttaaaaacaggtgacacagttgaagggtca
atccgtgctcctagagaaggtgaacggtattttgcccttttaaaagtaaatgctattaat
tttgatgttccagaaagagtgagaaataaaatacattttgataatttaaccccgctttat
ccggataaaagattcaatatggagctgaataatccggaaaataaagatatatcttctcgt
gttattgatctaatagctcctattggtaagggacaaagaagcttgatagttgctccccct
cgtacaggtaagacaattcttttacaaaatatagctcattcaattaaaaaaaatcatcca
gaatgttatctaattgtattgcttattgatgaaaggccagaagaagtaactgatatgcag
aggtccgtacaaggggaagtgatatcttcaacgtttgatgagtctgcagcccgccatgta
caggttgccgaaatggtcattgcgaaagctaagtgtcttgtagaatatggacttgatgtt
gtcatactattagattcaattactcgtttatgtcgtgcttataatgttctaatgccatct
tctggaaagattttaactggaggagtggacgcaaatgcacttcaacgtccaaaaagattt
tttggtgcagcgagaaatataaaagaagggggatctcttactattattggtacagcgttg
gtagatactgggagtcgtatggatgaagtgatttttgaagagtttaaaggtactggtaac
tctgaaatagttttagaaagaaagatagcagataagcgtattttccctgctatggatatt
attaaatctggaactcgtaaagaagatcttttggtagaacggcaagatcttcaaaaagtg
tttatgttacgtcgtattgtttcttctatgaatagttctgatgctatagaatttttaatt
gataagttaaaacaaaccaaagacaataaagactttttttattcaatgaataaacagaat
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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