KEGG   Labrenzia sp. VG12: CHH27_07780
Entry
CHH27_07780       CDS       T04984                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
labr  Labrenzia sp. VG12
Pathway
labr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:labr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHH27_07780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:labr03021]
    CHH27_07780
   03400 DNA repair and recombination proteins [BR:labr03400]
    CHH27_07780
Enzymes [BR:labr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CHH27_07780
Transcription machinery [BR:labr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CHH27_07780
DNA repair and recombination proteins [BR:labr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CHH27_07780
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD DUF211 RNA_pol_L_2 DUF4249
Other DBs
NCBI-ProteinID: ASP33156
UniProt: A0A222F3D9
Position
complement(1701447..1702469)
AA seq 340 aa
MTIQKNWQELIKPTKLEIKPGEDPRFLATVVAEPLERGYGLTLGNALRRILLSSLQGAAV
TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKQGPGVVTAGDIQ
TVGDVEVLNPELVLCTLDEGAEIRMEFTVNTGKGYHSSDRNRPEDAPIGLIPVDSLYSPV
KKVSYKVENTREGQVLDYDKLTLTVETDGSVKPDDAVAFAARILQDQLSIFVNFEEPQRE
VAEDTVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVANWPPENIDDLAKRYEDHQY
NT seq 1023 nt   +upstreamnt  +downstreamnt
gtgaccattcagaaaaactggcaagaactgatcaagccgaccaaactcgagatcaagccg
ggtgaagatccgcgcttcttggcaactgttgttgccgagccgctcgagcgtggctacggg
ctgacactgggcaatgccctgcgccgtatcctgctgtcctcgcttcagggcgcagcagtg
accgcggttcagatcgatggcgttctccacgagttctcgtcgatcccgggtgtccgggaa
gatgtcaccgacatcgtgctcaacatcaaggaaatcgccatccgcatggaaggtgaaggt
ccgaagcgcatggtcgtgcgcaagcagggccctggtgttgtgaccgcaggtgacatccag
accgttggcgatgtcgaggttctcaacccggaactggtgctctgcacgctcgatgaaggc
gctgaaatccgcatggaattcaccgtcaacaccggcaagggctaccattcttccgaccgg
aaccgtccggaagatgcgccgatcggcctgatcccggtcgacagcctgtactccccggtc
aagaaggtctcctacaaggtggaaaacacccgtgaaggccaggttcttgactatgataag
ctgaccctgaccgtcgaaaccgatggttccgtcaagccggatgatgccgtggcgttcgct
gctcgcattctgcaggatcagctgtccatcttcgtcaacttcgaagagccgcagcgcgaa
gtcgccgaggacactgtcccggaacttgcgttcaacccggcccttctcaagaaggtcgac
gaactggaactgtctgtccggtctgcaaactgcctgaagaacgacaatatcgtgtatatt
ggcgatctcattcagaagaccgaagcggaaatgctgcggaccccgaatttcggccgcaag
tcgctcaacgagatcaaggaagttctcgcccagatgggtctccatctcggcatggaagtc
gccaactggccgccggagaacatcgacgatctcgccaagcgctacgaagaccatcagtac
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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