KEGG   Labrenzia sp. VG12: CHH27_19955
Entry
CHH27_19955       CDS       T04984                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
labr  Labrenzia sp. VG12
Pathway
labr03030  DNA replication
labr03410  Base excision repair
labr03420  Nucleotide excision repair
labr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:labr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHH27_19955
   03410 Base excision repair
    CHH27_19955
   03420 Nucleotide excision repair
    CHH27_19955
   03440 Homologous recombination
    CHH27_19955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:labr03032]
    CHH27_19955
   03400 DNA repair and recombination proteins [BR:labr03400]
    CHH27_19955
Enzymes [BR:labr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CHH27_19955
DNA replication proteins [BR:labr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CHH27_19955
DNA repair and recombination proteins [BR:labr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CHH27_19955
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CHH27_19955
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 C1ORF64
Other DBs
NCBI-ProteinID: ASP35237
UniProt: A0A222F821
Position
complement(4282793..4285777)
AA seq 994 aa
MIRAMSTQDSSPALTADDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWK
LLQEGLTPEEGDEPTHFAVIFDHSAKTFRNDIYPEYKAHRPDPPEDLVPQFGLIREATRA
FSVHCIEQAGFEADDLIATYARQAAEQGARVTIVSGDKDLMQLIGPKVGMIDTMKNKIFG
EPEVFEKFGVGPDKVIEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLETLLDQAETI
KQKKRRENLIEFADQARVSKELVTLKQDVPVEVPVGDLSVTEMDGPKAVGFLKAMGFSTL
TKRIAEETGADLAAVEATDFQVPGWDVPDHKGRLMERAPSSTAPASPGGSGEAGDSPDGM
MVPQTVADARAESIRAIPVDSSAYETVTSLERLQEWCDAAFEKGYVAFDTETTSLDAMQA
DLVGLSLSTEPGKACYVPLAHVDGEGDLLGGGGLVEGQLPLKDALDVLKPMLEDRAVLKI
AQNLKYDWLVMTRYGIDISPFDDTMLLSYTVDAGKGGNGMDELSERWLDHKPIPFKEVCG
SGKSMITFDKVAIDKATAYAAEDADVTLRLWLILKPRLASDRMATVYETLERPMVPVLAR
MEKRGISVDRQMLSRLSGDFAQGMAAHESEIYELAGENFNIGSPKQLGDILFGKMGLPGG
KKTKTGAWSTSAQVLEDLAAEGHELPSKIVAWRQLSKLKSTYSDALPGYINPTTGRVHTS
YALAATTTGRLSSSEPNLQNIPVRTEAGRKIRKAFVAEKGHKLISADYSQIELRVLAHMA
DIPQLKKAFDDGLDIHAMTASEMFGTPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLG
IARGEAGDYIKTYFERFPGIKDYMEATKKQVHANGFVTTIFGRKAHYPDVNTKNPNMRAF
YERAAINAPIQGSASDILRRAMVRMEDRLTASKLTAQMLLQVHDELIFEVPDGEVDDTIP
VIRDVMENACDPALKLSVPLQVDARAADNWDEAH
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgatccgcgccatgtcgacgcaagattcctcccccgccctcactgctgacgaccacctg
atcctggtcgacggttccacctttatcttccgcgcctaccacgcgctgccgccgctgacg
cgcaagccggacgggctgccggtgggggccgtctccggcttctgcaacatgctgtggaag
ctgcttcaggaagggctgaccccggaagagggcgacgagccgacacattttgcggtgatc
ttcgatcattccgccaagaccttccgaaatgacatctaccccgaatacaaggcgcaccgt
ccggacccgcccgaagatctggtgccgcaattcggcctgatccgggaagcgacgcgtgcc
ttttccgtgcattgcatcgaacaggccggctttgaagccgacgacctgatcgcgacctat
gcgcgccaggcggcagagcagggcgcccgcgtcaccatcgtctccggcgacaaggacctg
atgcagctgatcgggcccaaggtcggcatgatcgacacgatgaagaacaagattttcggt
gagcccgaagtctttgaaaaattcggcgtcgggccggacaaggtcattgaggtccagtcg
ctggccggcgacagcgtggacaacgtgcccggcgtgcccggcatcggtctgaagaccgcc
gcgcttctgatcaacgaattcggcgacctggaaacactgctcgatcaggcagagaccatc
aagcagaagaagcgccgggaaaacctgatcgaatttgccgaccaggcccgcgtttccaag
gaactggtgacgctgaaacaggacgtcccggtggaggtcccggtcggcgacctgtctgtc
acggaaatggatggaccgaaagcggtcggttttctgaaggccatgggcttcagcacgctc
accaaacgtattgccgaggagaccggtgctgatctcgccgcggtcgaggcaacggacttc
caggtgcccggctgggatgtgcccgaccacaagggccgcctgatggaacgcgcgccgagc
agcactgcgccggcctccccgggtgggtctggtgaggctggagacagtccggacggcatg
atggtgccgcagacagttgccgatgcccgcgcggagagcatccgggcgatcccggtcgat
tccagcgcctatgaaaccgtaaccagcctcgagcgccttcaggaatggtgcgacgcagcc
ttcgagaagggctatgtcgccttcgacacggaaaccacgtcactcgacgccatgcaggcc
gacctcgttggcctgtcgctctccaccgagcccggcaaggcctgttatgtgccgcttgcc
catgtcgatggagaaggcgacctcctgggcggcggcggtctggtggaaggccagctgcca
ttgaaagacgcgctggatgtgctgaagccgatgctggaggaccgcgcggtcctgaaaatc
gcgcagaacctcaaatatgactggctggtgatgacccgctacggcatcgatatcagcccg
ttcgacgacacgatgctgctgtcctacacggtcgacgctggcaagggcggcaacggcatg
gacgaattgtccgaacgctggctcgaccacaagccgatcccgttcaaggaggtttgcggc
tccggcaagtcgatgatcaccttcgacaaggtggccatcgacaaggccaccgcctatgcc
gccgaggatgccgacgtcaccctgcgcctgtggttgatcctgaagccgcggttggcgagc
gaccggatggcaactgtctatgaaaccctggaacggccgatggtgccggtgctggcgcgc
atggaaaagcgtggcatttccgtcgaccggcagatgctgtcgcggctttccggcgatttc
gcgcagggcatggcggcgcatgaatctgaaatctacgaacttgccggcgaaaacttcaac
atcggctcgccgaagcagctcggcgacattctcttcggcaagatgggccttcctggcggc
aagaaaaccaagaccggtgcctggtcgacctctgcccaggtgctggaagacctcgccgcc
gaaggccatgaactgccgtcgaagatcgttgcctggcgtcagctctccaagctgaagtcg
acctattcggatgcacttcccggctacatcaacccgaccacgggccgggtccatacgtcc
tatgcgctggcagcaaccaccaccgggcgcctgtcgtcatccgaaccgaacctgcagaac
attccggtcaggaccgaagcgggccgaaaaatccgcaaggcctttgttgcagaaaaaggc
cacaagctgatttcggccgactacagccagatcgagttgcgcgtgctcgcccatatggcc
gatataccccagctcaagaaggcctttgacgacgggctcgacattcacgccatgacggcc
agcgaaatgttcggcacgccgatcgagggcatggacccgatggtgcgccgccgcgccaag
gccatcaacttcggcatcatctacggcatatcggcctttggcctggccaaccagctcggc
atcgcacgcggtgaggcaggcgattacatcaagacctatttcgagcgcttcccgggtatc
aaggactacatggaagcgaccaagaaacaggtgcatgcgaacggtttcgtcaccaccatc
ttcggccgcaaggcgcattatccggacgtgaacaccaagaacccgaacatgcgggccttc
tatgagcgcgccgcgatcaacgccccgatccagggctcggcctccgacatcctgcgccgc
gccatggtgcgcatggaggaccggctgacggcgtccaaactcactgcgcaaatgctgttg
caggtgcatgatgaactgattttcgaagtcccggacggcgaagtggatgacaccatcccg
gtgatccgcgacgtcatggaaaatgcctgcgatccggcgctgaaactctccgtcccgctg
caggtcgatgcaagggcggcggacaattgggacgaggcacactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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