KEGG   Labrenzia sp. VG12: CHH27_22025
Entry
CHH27_22025       CDS       T04984                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
labr  Labrenzia sp. VG12
Pathway
labr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:labr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CHH27_22025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:labr03400]
    CHH27_22025
Enzymes [BR:labr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CHH27_22025
DNA repair and recombination proteins [BR:labr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CHH27_22025
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII PriA_CRR Helicase_C AAA_30 Peripla_BP_4 zf-CHY TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ASP35585
UniProt: A0A222F8Y1
Position
4748590..4750785
AA seq 731 aa
MLFDDPDFQETIASVLVPVAVPRAYTYKVPPGKTVVPGTIVRVPLGPREVVGAVWDGEPD
AAINPKKLKSITHVYEETPPLDADLRRFVDWVAGWTLGAPGMVLRMVLRSEEALEPEAPV
PGVRRIEGAEPDRMTPARGRVLATLEDGFAWTRSGLAHAAGVSSSVIDGLLKQEVLETVM
MPAAPPSPKPQLDYAQKDLTKAQQAAAEGLVSCFDKGGSVALIDGVTGSGKTEVYFEAIA
EALRRGKQALVLLPEIALTEQFLRRFEQRFGVYPAEWHSQITVKNRSRVWRGVSSGDVRV
VIGARSSLFLPFRELGLIIVDEEHDAAFKQDDRVPYSARDMAVVRGHLSGFPVVLASATP
SVESMVNADLGRYRLFELPERASGAALPDLSAVDMRQDGPERGRWLAPELVHAIKDTFND
GGQSLLFLNRRGYAPLTLCRTCGHRFQCAHCSTWLVEHRFQKKLVCHHCGHTEPVPQACP
SCQSTDSLVACGPGVERIAEEVSDLFPDARTLVLSSDMAGGPERLKREMKIVEEGGADIV
IGTQLVAKGHNFPKMKLVGVVDADLGLAHGDPRAAEKTFQLLAQVTGRAGRVTGGGKGIL
QTYNADHPVIRALLASDKTAFYQAEIDSRRAAGLPPFGRLAAVIISGPDRTFAEGYARAL
ARAAPEDTAVTLLGPAEAALAMVRGRYRFRLLAMAPRQFDLQSYLRQWLDAGPRPTKGLR
LQVDIDPQHFL
NT seq 2196 nt   +upstreamnt  +downstreamnt
gtgctgtttgacgatccggacttccaggagacgattgccagcgtgctggtgccggtcgcc
gtgcccagggcctatacctacaaggttccgccaggcaagacggtggtgccgggcaccatt
gtgcgggtgccgctcggcccgcgtgaggttgtcggcgccgtctgggacggagagccggac
gccgcgatcaatccgaagaaactgaaatccatcacgcatgtctatgaggagacgccgccg
ctcgatgccgacctgcgccggtttgtcgactgggtcgccggctggaccctgggcgcgccg
ggcatggtgctgcgcatggttctgcgttccgaagaggcattggaaccggaagccccggtt
ccgggcgtgcgccggatcgagggcgcggaacccgatcgcatgacgccggcacgcggccgg
gtgctggcaacgctggaggatggttttgcctggaccaggagcggtctggcccatgcggcg
ggtgtgtcttcttcagtcattgacggactgctgaaacaggaagtgctggaaacggtgatg
atgccggccgcacccccatcaccgaaacctcagctcgactatgcgcaaaaggacctgacc
aaggcacagcaggccgcggcggaagggctggtgtcctgtttcgacaaggggggcagtgtt
gctctgatcgacggtgtcaccgggtccggcaagaccgaagtctatttcgaggcaattgcc
gaggcacttcggcgcggcaagcaggccctggtgctgctgccggaaatcgcgctcaccgag
cagttcctgcgccgcttcgagcaaagatttggcgtctatccggccgagtggcattcgcag
atcacggtgaagaacaggtcccgggtctggcgtggggtttccagtggcgatgttcgcgtt
gtcatcggcgcccgctcgtcgctcttcctgcccttcagggaactcggcctgatcattgtc
gacgaggaacacgacgcggccttcaagcaggatgaccgggtgccctacagtgcccgcgac
atggccgtcgtccgcgggcatctctccggctttccggttgtgctcgcctcggcgacgcct
tcggtcgaaagcatggtcaatgcggatcttggccgctaccgcctgttcgagttgccggaa
cgggcatccggtgcggccctgccggatctcagcgcggtcgacatgcgccaggacggcccg
gaacggggacgctggctggcgcccgaactggttcatgccatcaaggacaccttcaacgac
ggcggtcagtcgcttctgttcctgaaccgccgcggctatgcaccgctcaccctgtgccgg
acctgcggccaccggtttcagtgcgcccattgcagcacctggctggtggaacaccggttc
cagaaaaagctggtctgtcaccattgcggtcacaccgagccggtgccgcaagcctgcccg
tcctgccagagcaccgacagcctggttgcctgtgggcccggcgtggagcgaatcgccgag
gaagtctccgatcttttcccggacgcccgcacgctggttctgtcatccgacatggcgggc
gggccggaacgcctcaagcgggaaatgaaaatcgtcgaggaaggcggcgccgacattgtc
attggcacgcagctggtcgccaagggccataattttccgaagatgaagctggtcggcgtg
gtcgatgcggatctgggcctggcccatggcgacccgcgcgcggcagagaaaacctttcag
ctgctcgcccaggtgacgggccgcgcggggcgcgtgaccggtggcggcaagggcatcctg
cagacctacaacgccgatcatccagtgatccgggcgttgctggccagcgacaagacggcc
ttctaccaggccgagatcgactcccgccgggctgccggcctgccgccttttggccgattg
gccgctgtcatcatttccgggccggaccgcacctttgccgaagggtatgcccgcgcgctc
gcccgtgcggcgcccgaagacacggccgtgaccctgctcggtccggcggaggcggcactg
gcgatggttcgcgggcgctacagattccgtctcctggcgatggccccgcgccaattcgac
ctgcaatcctatctgcgtcaatggcttgatgctggccccagacccacgaaggggctgcgc
ctgcaggtggacatcgacccgcagcattttctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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