KEGG   Lacinutrix sp. Bg11-31: CW733_00500
Entry
CW733_00500       CDS       T05225                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
laci  Lacinutrix sp. Bg11-31
Pathway
laci03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:laci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CW733_00500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:laci03400]
    CW733_00500
DNA repair and recombination proteins [BR:laci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CW733_00500
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CW733_00500
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 AAA_22 DUF87
Other DBs
NCBI-ProteinID: AUC80696
UniProt: A0A2K8XD35
Position
complement(124926..126926)
AA seq 666 aa
MQFKIQSEFSPTGDQPSAIKKLVNGLNSNERYQTLLGVTGSGKTFTVANVIEQTQRPTLV
LAHNKTLAAQLYSEFKQFFPENAVEYFVSYYDYYQPEAYIPTSGVYIEKDLSINEEIEKM
RLSTTSSLLSGRRDVIVIASVSCLYGIGNPVEFQKNVISIERDQQISRTKLLHQLVQSLY
SRTEADFRHGNFRIKGDTVDIFPSYADNAFRVHFFGDEIELIEQFDIQTNKVIEEYERLN
IYPANMFVTSPDILQGAIKSIQDDLVKQYDYFKEIGKHLESKRLKERTEFDLEMIRELGY
CSGIENYSRYLDGRMPGTRPFCLLDYFPDDYLMVVDESHVTISQVHAMYGGDYSRKVNLV
DYGFRLPAAMDNRPLKFEEFESLQNQVLYVSATPADYELQKTDGVYVEQVIRPTGLLDPI
IEVRPSLNQIDDLIEEIQQRIEKDERTLVTTLTKRMAEELTKYLSRISIRVNYIHSDVDT
LERVQIMQDLRKGIYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSARSLTQTVGRA
ARNLNGKAIMYADKITKSMQKTIDETEYRREKQIAYNTENNMVPKALNKSLDSALGKNSV
STYSYELEAARAAEPESEYLTKGELEKKIREKRKVMEQAAKALDFIVAAKLRDEIKSYQG
KLETLK
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgcaattcaaaatacaatcagaatttagtccaacaggagatcagccttcagcaataaaa
aaattggtgaacggcttaaactctaatgagagataccaaactttacttggtgttacaggt
tctggaaaaacatttacagttgctaatgttattgaacaaacacaaagaccaacattagta
ctagctcacaataaaactttagctgcacaattatacagtgagtttaaacagttttttcct
gaaaatgctgtggagtattttgtgtcttattacgattattaccaaccagaagcctacata
ccaacttctggtgtttatatagaaaaagatttatctattaacgaggagattgagaaaatg
cgcttaagcacaacctcttctctactctctggtcgtcgcgatgttattgtaatagcatcg
gtttcttgtttgtatggtattggaaatcctgtagagtttcaaaaaaatgtaatttctata
gaacgcgatcagcaaatttcgcgtacaaaactattgcatcaactagtacaaagtttgtat
tcgcgtaccgaagcagattttagacacggtaattttagaataaaaggagatactgtagat
atattcccaagttatgcagacaatgcttttagagttcatttttttggagacgaaatagaa
ttaatagaacaattcgatatacaaaccaacaaggttattgaggagtacgaaagactaaac
atctatcctgcaaacatgtttgtaacctctccagatattttgcaaggtgccataaaaagt
attcaagacgatttagtaaaacagtatgattactttaaagaaattggcaagcatttagaa
tccaaaagacttaaagaacgtacagagttcgatcttgaaatgattcgcgaacttggttac
tgctctggtattgaaaattactctcgctaccttgatggtagaatgccaggcacacgacct
ttctgcttattagattattttccagacgattatttaatggttgtagacgaaagtcatgta
acgatctcacaagtgcatgctatgtatggaggtgattacagccgaaaagtaaacctagtc
gattatggttttagattacctgctgcaatggataataggcctttaaaatttgaagagttt
gaatctttgcaaaaccaagtattgtacgtaagtgcaacgcctgcagattacgagcttcaa
aaaaccgatggtgtttatgtagagcaagttattagaccaacaggtttactagatcctatt
attgaagtacgaccaagcttaaaccagatagatgatttaattgaagaaatacaacaacgt
atcgagaaagacgaacgtactttagttaccacgttaaccaaacgtatggccgaagaatta
accaaatatttaagccgaatttctattcgtgttaattacatacatagtgatgtagatact
ttagagcgcgtacaaattatgcaagatttacgtaaaggtatttacgatgttttggttggt
gtaaacttattgcgtgaaggtttagatttaccagaagtgtctttagttgctattttagat
gcagataaagaaggctttttacgttcggcaagatcattaacacaaaccgttggtagagct
gcaagaaacttaaatggtaaagccattatgtatgcagataagattaccaaaagtatgcag
aaaactattgatgaaaccgaatatagacgcgaaaaacaaatagcttacaatacagaaaat
aacatggtaccaaaagccctaaacaaaagtttagatagtgctttaggtaaaaactctgta
agtacttatagctacgaattggaagctgcacgtgctgcagaaccagaaagcgaatattta
actaaaggtgaattagaaaagaaaatacgtgaaaaacgtaaagttatggagcaagcagca
aaagctttagattttattgttgctgcaaaattacgtgacgaaattaaaagttatcaaggg
aagttagaaactttgaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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