KEGG T02823: N175

Vibrio anguillarum M3: N175_01120

Entry

N175_01120        CDS       T02823

Symbol

gidA

Name

(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein

K03495

tRNA uridine 5-carboxymethylaminomethyl modification enzyme

Organism

lag Vibrio anguillarum M3

Brite

KEGG Orthology (KO) [BR:lag00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lag03016]
    N175_01120 (gidA)
   03036 Chromosome and associated proteins [BR:lag03036]
    N175_01120 (gidA)
Transfer RNA biogenesis [BR:lag03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    N175_01120 (gidA)
Prokaryotic type
    N175_01120 (gidA)
Chromosome and associated proteins [BR:lag03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    N175_01120 (gidA)

SSDB

Motif

Pfam:

GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 Pyr_redox_2 Thi4 HI0933_like NAD_binding_9 DAO AlaDh_PNT_C

Other DBs

NCBI-ProteinID:

AGU56489

Position

1:226855..228753

AA seq 632 aa
MLYHEKFDVIVVGGGHAGTEAALAAARTDQSTLLLTHNIETLGQMSCNPAIGGIGKGHLV
KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKSYVRDVLENTPNLTL
FQQAVDDLIVENDRVMGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENFSGGRAGDPPS
IALAQRLRELPFRVDRLKTGTPPRIDARSVDFSVLETQHGDNPTPVFSFMGQREQHPRQI
PCYITHTNDKTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPE
GLTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFNPQDLKQTYETK
FISGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTM
GTKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDVRWARFNQKMENMEIERQRL
KQTWMNPNSVGVDALNALLKTPMSREASGEDLLRRPEITYQQLTSLESFAPALNDSEAAE
QVEIQIKYDGYIQRQQDEIDKSLRHEHTKLPLDLDYKQVKGLSNEVILKLNNAKPETVGI
ASRISGVTPAAISILLVYLKKQGVLKKGEDAA

NT seq 1899 nt +upstreamnt +downstreamnt
atgctttatcacgaaaaatttgacgtcattgtggtcggtggtggccatgctggaacggaa
gccgctctcgctgcagctcgtactgatcaaagtacgctattgcttacccataacattgag
actctaggacagatgtcgtgcaatcctgcgattggcggaattggtaaaggacatctggtt
aaagaagtcgatgccatgggcggtctaatggcacaagcgattgatcatgcaggtattcaa
tttagaacactcaatgcctcaaaagggccagcagttcgagcgactcgagcccaagcagat
cgtgcgctttacaaatcgtatgtgcgtgatgtgcttgaaaacacgccaaacttaactttg
ttccaacaagcggtcgatgatcttatcgttgaaaatgatcgtgtaatgggcgttgtgact
caaatgggcctcaaattccacgccaaagcggtggtattgacggtaggcaccttccttggt
ggaaagatccacattggtcttgaaaacttctcaggaggccgcgcaggcgatcctccatcg
atcgcattagcacaacgtttacgtgaactgccatttcgagttgatcgtttaaaaacgggt
acgccaccaaggatcgatgcacgcagtgtggacttctcagtgttagaaacacaacacggt
gataacccaacgcctgttttttccttcatgggacaacgtgaacagcatccacgtcaaata
ccatgctacatcacgcataccaacgataaaacgcatgatgtgatccgtgccaatcttgat
cgtagtccgatgtacgcaggtgtcatcgaaggtatcggcccacgctactgcccatcgatc
gaagacaaagtcatgcgttttgccgacaaaaatagccatcaaatttttatcgagcctgaa
ggtttgaccacgacagaactctaccctaacggtatttccaccagcttaccgtttgatgta
caagtgcagatcgttcgctcaatgaaagggtttgaaaacgcacatattgttcgtccgggt
tacgccatagagtacgattttttcaatccacaagatttaaaacaaacctatgaaaccaaa
ttcatcagtggtttgttctttgctggtcaaatcaacggcaccaccggatacgaagaagcg
gcagcacaagggttaatggctggtttgaatgcaagcttatttagccaagaaaaagaaggc
tggagtccacgccgtgatcaagcttacatgggcgtgttgatcgatgatctttccactatg
ggtaccaaagaaccttatcgcatgtttacctctcgcgctgaatatcgcttactgctacgc
gaagataacgccgatttgcgtttaaccgaaaaagccagagagttaggtttagtcgatgat
gtgcgctgggcgcgttttaatcaaaaaatggaaaacatggaaatcgagcgtcaacgtttg
aaacaaacgtggatgaacccgaactccgttggtgttgatgcactgaatgcgttgctcaaa
acacccatgtctcgtgaagcaagtggtgaagatctactacgtcgacctgaaatcacctat
caacagctcacatcgcttgagtcatttgcaccagcattgaacgatagtgaagcggctgag
caagttgaaattcaaatcaaatacgatggttatattcagcgtcagcaagatgagatcgac
aaatcattgcgccatgagcacactaaattgccgctggatcttgactataaacaggtcaaa
ggcttgtccaacgaagtgatccttaagcttaacaatgccaagcctgaaacggttggtatt
gcctctcgtatttccggtgttacaccagctgctatttctatcttattggtttatttgaaa
aagcaaggtgtactgaagaaaggggaagacgccgcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (27)   

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