KEGG T02823: N175

Vibrio anguillarum M3: N175_11920

Entry

N175_11920        CDS       T02823

Symbol

rluD

Name

(GenBank) 23S rRNA pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

lag Vibrio anguillarum M3

Brite

KEGG Orthology (KO) [BR:lag00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lag03009]
    N175_11920 (rluD)
Enzymes [BR:lag01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     N175_11920 (rluD)
Ribosome biogenesis [BR:lag03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    N175_11920 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 S4_2

Other DBs

NCBI-ProteinID:

AGU58312

Position

1:complement(2535419..2536393)

AA seq 324 aa
MAQQIELTNTVKDSQLGQRLDQAVAELFADFSRSRLKEWLLEGKVQVNGEVITKPRTKVM
GGEIITVQAELEDEERWEAQDIPLNIVYEDDDIMVINKPRDFVVHPGAGTPDGTVLNALL
FHYPAIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTHLVRALQKRKITREYEAIVIGTMT
AGGMIDKPIGRHSTKRTLMAVSPMGKPAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM
SYLQHPLLGDTAYGGRARIPKGATQELTDMIRGFDRQALHAVMLRLEHPVTGEMLEFHAP
VPDDMIIMAEALRVDTKLNKKDEF

NT seq 975 nt +upstreamnt +downstreamnt
atggctcagcagattgaattaacaaatacagtaaaagatagccagttaggtcaacgttta
gaccaagctgtcgctgaattattcgcagatttctctcgttcacgtttaaaagagtggctt
ttagaaggcaaagttcaggtcaatggtgaggtgatcactaaaccaagaacgaaagtcatg
gggggagaaatcattacggtccaagccgagcttgaagatgaagagcgttgggaagcgcaa
gatatacctttaaatatcgtgtatgaagatgacgatattatggtcatcaacaaaccacga
gattttgtcgttcatccaggcgcgggtactccagatggcacagtcttaaatgcactgttg
ttccactatccagctattgcagaagtacctcgtgcggggattgtgcatcgtttggataaa
gatacgactggtctaatggtggtcgctaaaacggttcctgcacaaacacacttagttcga
gcgttgcaaaagcgtaagattacgcgtgaatatgaagcgattgtgatcggtactatgact
gctggtgggatgatcgataagccgattggccgccactcaacaaaacgtacattgatggcg
gtaagcccgatgggtaaaccagcggtaactcactatcgtgtggccgagcatttccgtgaa
catactcgccttcggttgcgtttagaaacgggccgtactcaccaaattcgtgtgcatatg
tcatatttacagcatcctttgcttggggataccgcctatggtggccgcgctaggattccg
aaaggggcaacgcaagagctgaccgatatgatccgtggttttgatcgtcaggctttgcat
gccgttatgcttcgacttgagcatcctgtgactggtgaaatgctagaatttcatgcgcca
gtacctgacgatatgatcattatggcggaagctttacgcgtagatactaagttgaataaa
aaagacgagttctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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