KEGG   Ligilactobacillus agilis: BEN83_00040
Entry
BEN83_00040       CDS       T05198                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lagl  Ligilactobacillus agilis
Pathway
lagl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lagl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BEN83_00040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lagl03400]
    BEN83_00040
Enzymes [BR:lagl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BEN83_00040
DNA repair and recombination proteins [BR:lagl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BEN83_00040
SSDB
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 UvrD_C_2 AAA_14 PIF1 AAA_24 PhoH NB-ARC AAA_22 Herpes_UL33 TPR_19 TPR_14 AAA_11 TPR_16 ANAPC3
Other DBs
NCBI-ProteinID: ASR40019
UniProt: A0A222W1F7
Position
6605..8755
AA seq 716 aa
MDAKYQQARQLLAAGKVKAAQTIFREIFVLNPKYKSVCYFLGKCAYLQGKNKEVKHYLKL
HLDGRARKNIGPAFKYLCLLACKEKQYLKAQHYLAQAEKYGLKATSLAKLQKQLTQAASE
PTTMAFTYQKLSKKGTPIASCKQAGFKGAKFFIHGLPPKLLARFQELKTLQLTVTYPQKT
DIPGYLTCRLTDGRTLYKDYLPYLPSLYYRSAFNDYLEDDKYFKFKWEKSRVFSLLLVSG
FSLEIVAKYLDANDLLDQAAAEHLQSCQGLVSLKEAGETLPVSAKEQLSDLDLLKEFGFI
CAKECGKTIHLASKCRFERQLRRALKARSKVAFPYRKLQKQFRPSQEQARFINWLKKNDQ
QVISLLGVGGSGKTYTLSKLLDPNAVLALAPTHKARLNLVDHGFSQNDTVQHLLFKLEAE
PELVLTGIKVILIDEISMVTTQMLAQLFDKLGPGYRYLLAGDDQQLPPVSQDLDALNVCG
DLMGLIKQEGSYYEFKTNLRCQNKQTAALIAAIRAKNLQLVTKKVGKFTGAKRDMLNYKY
FHPALEDCMILAHRNLTVGKINQQYYRVLTKDGRAKTPFFFKNDYGHGGFFEGAQVVFYQ
NGDEKQRYGYTNSEFGIVTELHLEDKEPKIKVKTASNEYELPLYVANRDLFLAYALTIHK
AQGSGSRRVYMLEAANDSLLYTAVSRSRGELFFVDLDASQAVEALSQPVAKKRNVY
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggacgcaaagtatcaacaagctcgccagttgctggcggcggggaaggttaaagcggcg
cagactattttccgggaaatatttgtgctgaatcccaaatataagtcggtctgctatttt
ttaggtaagtgtgcttatttgcaggggaaaaataaggaagtaaagcactatctgaaattg
catttagacgggcgggcgcgtaaaaatattggcccggcctttaaatacctgtgcttacta
gcttgtaaagaaaagcagtatttaaaagcccaacactatctagcccaggctgaaaagtat
ggtttaaaggcgactagtctagcaaaactacaaaagcagctgacacaagcagcctccgag
ccgacaaccatggcctttacctaccaaaaattgagtaaaaaggggacgccaattgctagt
tgtaaacaagccggctttaaaggggctaagttttttattcacggactgcctcctaagttg
ttagcccgcttccaggagttaaaaacactccaactaaccgtcacctacccacaaaaaacg
gacatcccgggctatctaacctgcaggctaacggacggtcggactctgtataaggactac
ttaccctatctacctagtctgtattaccggtcagcctttaatgattacctagaagacgac
aagtacttcaaatttaagtgggagaagtcgcgggtgttttccctgttgctggtttccggt
ttttcgctggaaatagtggccaagtacttagatgcaaatgatttacttgaccaggcagct
gctgaacacttgcagagttgtcaggggctagttagcctaaaagaggcgggggaaacttta
cccgtaagcgctaaggaacagttaagtgatttagatttgctaaaagaatttggctttatc
tgtgctaaggaatgtggtaagaccatccaccttgcaagcaagtgtcgctttgaacgccag
ctcagacgggcattaaaagcaagaagtaaggtggcttttccctacaggaagctccagaag
caatttcggcctagccaagaacaggcgcgctttattaactggttaaagaaaaatgaccag
caggtaatttcgctattaggggtaggtggcagtggcaaaacctataccctcagcaagtta
ctggaccctaacgctgttttggcgctagcacctacccacaaagcccgattgaatttggtg
gaccatggctttagtcaaaatgatactgtccaacacctcttgtttaaactggaagctgag
cccgagctggtcttaaccggaatcaaagtaattttaattgatgaaatttcaatggtaact
acccaaatgttagcgcagttgtttgacaaattagggccgggctaccgctatttactcgcc
ggagatgatcagcaactgccaccagtcagccaggatttagatgccctcaatgtttgtggt
gatttgatggggttaataaagcaggaaggtagttattacgaatttaaaaccaacctccga
tgccaaaataagcagacagccgctttaatcgcagcgattcgggcgaaaaacttacagctg
gtgactaagaaagtcggtaagtttacaggcgctaagcgggatatgcttaactataagtat
tttcacccggccttagaggactgcatgattttggcacaccggaatttgacggtaggcaaa
attaaccagcagtactaccgggttttaaccaaagatgggcgggccaagaccccgtttttc
tttaagaatgactatggacacggaggcttttttgagggagcgcaggtggtcttttaccaa
aatggcgatgaaaagcaacggtatggttataccaacagtgagtttgggattgtaaccgaa
ctgcacttggaagataaggagcctaaaattaaagtcaaaacggcaagtaacgagtatgaa
ctacccttgtacgttgctaaccgggacttatttttagcctacgctttgacgattcacaag
gcccaaggcagcggctctaggcgggtttacatgctggaggccgctaacgatagcttgcta
tatacggcggtttctcgctcgcggggagagttattttttgtagacttagacgctagccag
gcagtggaagccttaagccaaccagtagctaagaaaagaaatgtttattga

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