KEGG   Ligilactobacillus agilis: BEN83_06960
Entry
BEN83_06960       CDS       T05198                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lagl  Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:lagl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lagl03009]
    BEN83_06960
Enzymes [BR:lagl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BEN83_06960
Ribosome biogenesis [BR:lagl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BEN83_06960
SSDB
Motif
Pfam: PseudoU_synth_2 C1q
Other DBs
NCBI-ProteinID: ASR41227
UniProt: A0A222W4Y2
Position
complement(1358942..1359835)
AA seq 297 aa
MEIKWTYQEQAPIKLKTFLKQKGLSRRLLATIRNDNGQVEVNGKSGRIVDKLYPNDQVWL
RLPVEKNRKQSLAKSYVPLKIIYEDRDFLVIDKPARVATIPSRLHPVDSLVNRVAGYYDL
RGYQGIIPHVATRLDRDTSGLVLFAKHRLAHALLDQQLRQHEIDKRYWALLTGPVTWTKL
EVNQPIARLATSTMKRGVAADGKAALTDFEVIHRLGKATLCQVKLHTGRTHQIRVHSQYL
GHPLVGDELYGGNIELPLQRQALHCQQLSFYHPFLEKQLRFVSELPADMQGYIEKNR
NT seq 894 nt   +upstreamnt  +downstreamnt
atggagattaagtggacttaccaagaacaagccccgataaagctaaagacgtttttaaaa
caaaaaggattatcgcgtcgcttgctagcaaccatccgtaatgataatgggcaagtggaa
gttaatggcaaatccggccgaattgtggataaactttacccgaacgatcaagtttggcta
cggttgccggtcgaaaaaaatcgcaagcaaagtctagctaaatcctatgtccccttaaag
attatctatgaggatcgagattttttggtaatagataaacctgcccgggtggcgactatt
ccttcgcggttgcatccggtagattcattggtcaatcgagttgctggttattatgacttg
cgaggatatcaagggattattccccacgtggctactaggttagatcgggatacatctggt
ttggtcttatttgccaagcaccgcttagcacatgctttattagaccaacaactacgtcag
cacgaaattgataaacgttactgggcgcttttgacaggaccagttacttggactaagtta
gaggttaaccagccaattgcacgcttggcaaccagcacaatgaaacggggagtagccgcc
gatggcaaggcggcgttaacggactttgaagttatacaccgcttaggaaaagccaccttg
tgccaggttaagttacatactggtagaacacaccagattagggtgcatagtcagtatttg
gggcacccattggttggtgatgaattgtatggtgggaatatagagctgccgcttcagcgc
caagccttgcattgtcagcagttaagtttttatcaccctttcttggaaaaacagctacga
tttgttagcgaattgccggcagatatgcaaggttatattgaaaaaaacagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system