KEGG   Amylolactobacillus amylophilus: LA20533_05485
Entry
LA20533_05485     CDS       T05031                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lah  Amylolactobacillus amylophilus
Pathway
lah03420  Nucleotide excision repair
lah03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LA20533_05485
   03430 Mismatch repair
    LA20533_05485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lah03400]
    LA20533_05485
Enzymes [BR:lah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LA20533_05485
DNA repair and recombination proteins [BR:lah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LA20533_05485
   MMR (mismatch excision repair)
    Other MMR factors
     LA20533_05485
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 AAA_19 AAA_30 Viral_helicase1 PhoH SLFN-g3_helicase DEAD AAA_14 NACHT UvrD_C Catalase_C TMV_coat AAA_16 PIN_3
Other DBs
NCBI-ProteinID: APT18743
UniProt: A0A0R1YGW6
Position
1045024..1047333
AA seq 769 aa
MDKHELVNQAAEQARLDHVLAEITQQKSKLSGDIARVKSEEKHLNEHFYDDVRLNYGDAS
ATMETALSIRQQQQLLQERNNTWQHSTHELATLQRLEQKPYFARVDFHEQGEPKAETIYI
GLGSLSDRDDNFLIYDWRAPISSIYYDGKLGEVTYESPDGPQKVDLTLKRQFIIEQGKIK
AMFDTQETIGDQMLLEVLNEKSSTQMKSIVTTIQREQNKIIRDTKSDLLFVQGAAGSGKT
SAILQRIAYLLYRYRGNLTSDQVIMFSPNQLFNDYIENVLPELGEQNMVQMTYWQFLSRR
IPGLSVQNLFQQFEETQTNQQSNLEKLKNDVLFFRATKRYASHLEKAGVQFKDIFFKNQT
EPYFSKEQIKEIYYSFNENYHLRNRIESTKEALLKLLNQRVDAETRKPWVQDLIEHMSAE
ELRELYDRPDQEFESSAKETGFLARKIVLQQLKTVSRKIHHNQFLNIRGQYVHFLKRVPQ
LIELSEFGLTETDWADSIEQLKNDFRQRQVKMADASAYLYLYDLVTGRRGETSMRYVFID
EIQDYTPFQLAYLKYNFPRAKFTMLGDLNQAILIKEDSSSLLSEISGLFDEEKTKVVQLT
TSYRSTAQVTNYTKEILSSGQQIEAFDRVGPLPVVYGRKNVTELIQVVATMLQKPENEKV
ATAIITKTLEEAQQVFELLKANGLKTTLIGSQNQRLVPGAIVVPAYLAKGLEFDAVIMWD
ASSKNYQGDFERQLVYTIASRAMHTLTILYQGEFSPLLAHISPDLYEVR
NT seq 2310 nt   +upstreamnt  +downstreamnt
atggacaaacatgagttagtgaatcaagccgctgagcaagcacgtctcgaccatgtcttg
gctgaaataacgcaacaaaaatccaagttgtctggcgacatcgcccgggtgaaatcagag
gagaagcatctgaatgagcacttctatgatgacgtccggttgaactatggggatgcatct
gccacgatggagacggcgctctcaatcaggcaacagcaacaactgctccaagaacggaat
aatacatggcaacactcaactcacgaattggccaccctgcagcgcttagaacaaaagccc
tattttgcacgcgtggactttcatgagcagggtgaaccaaaggccgaaaccatctacatc
ggtctgggctcgctgagtgaccgtgatgataatttcctcatttatgattggcgagcaccc
atttcgtcaatctattatgacggtaagctgggtgaggtaacttatgaatcacctgatggc
cctcagaaggtcgacctgaccctaaagcgtcaattcatcattgaacagggtaaaatcaag
gcaatgtttgatacccaggaaaccattggtgatcagatgctccttgaggtgttgaacgag
aagtcatcgacgcagatgaagtccatcgtgaccactattcaaagggagcagaacaagatt
attcgggacaccaagtccgacctgctttttgttcaaggtgcagctggctcaggtaaaacc
agtgcaatcttgcagcggatagcctatttgctctaccgctaccgtggtaatttaaccagt
gaccaggtaatcatgtttagtccgaaccaattatttaacgactacatcgagaatgtccta
ccggagctcggtgaacagaacatggtccagatgacatactggcaattcctctccagaaga
attcctggcttgtctgttcagaatctgtttcagcagtttgaagagacccagacgaatcaa
cagtctaaccttgaaaagctgaaaaatgacgtgctctttttcagagcgactaagcgatat
gctagtcacctggagaaagcgggtgtgcagttcaaggacatcttcttcaagaaccagact
gagccctatttcagcaaggaacagattaaggaaatttactacagctttaacgagaactac
catttgcgtaatcggattgagtcaacgaaggaagctctgctgaagttattgaaccaacga
gttgacgcggagacgcgcaaaccctgggtacaagacttgattgagcacatgagtgcagag
gaattgcgcgagctctacgaccggcccgaccaagagtttgaatccagtgcgaaggagaca
ggctttctcgcccgcaaaattgttttgcagcaattaaagacagttagtcggaagattcat
cacaaccaattcctgaatattcgtggtcaatacgtgcatttcctaaagcgtgtgccgcaa
ttgattgagttgagcgaatttggtttaaccgagactgattgggcggattctattgagcag
ctgaagaatgacttcaggcagcgccaggtgaagatggctgacgcgtccgcttacctctac
ctgtatgatttggttacgggacgccgcggagaaacttcgatgcgttacgtctttatcgat
gagattcaggattacacgccgttccaattggcctacctcaagtataattttccacgcgcc
aagttcaccatgctgggtgatttgaatcaggcaattctgatcaaagaggatagcagctcg
cttctgagtgaaatatcaggcttgtttgacgaagagaagacgaaagttgtgcaactaacg
acctcttaccgttccacggcacaggtgacgaattacacgaaggaaattctgagttccggg
cagcagattgaagcgtttgaccgagtgggaccattgccggttgtttacgggcgtaaaaac
gtgacagagctgatccaggtcgtcgcaacaatgctgcaaaagccggagaacgaaaaggtg
gccacagccataatcacgaagacgctggaagaagcacaacaggtatttgaactgttgaaa
gcaaatgggctcaaaacgactttgattgggtcccagaatcagcgactcgttcccggagcc
atcgtggtgccggcatacttggccaaaggattggaattcgatgcggtcatcatgtgggat
gcctcgagcaagaattatcaaggtgactttgaacgccaactggtctacacgattgcctca
cgggcaatgcacacgttgaccattttgtatcagggagaatttagtccgctactcgcgcac
atctcacccgatttatatgaagttcgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

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