KEGG   Lactobacillus acidophilus 30SC: LAC30SC_08375Help
Entry
LAC30SC_08375     CDS       T01436                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lai  Lactobacillus acidophilus 30SC
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lai00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LAC30SC_08375
Enzymes [BR:lai01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LAC30SC_08375
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LAC30SC_08375
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1616810..1617640)
Genome map
AA seq 276 aa AA seqDB search
MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL
LIRLNDNLTIVSHLRMEGKYHLTTPEVPKDKHDHVEFIFTDGTALRYNDVRKFGRMQLVL
TGTELQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGLGNIYVDETL
WQSKIHPLSLANKIPADKVEDLRKNINETIKIAIEKRGTTVHSYLDANGEVGGYQEMLQV
YGHAGEACPRCGTTLEKIKVSGRGTTFCPHCQVIYK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaaatgcccgaagttgaaactgtacgaagaactttaactcctttaattaaagga
aagacaattgaaaaagtaattttgtggtatcccaaaatcgttgcgacggaccatgacaag
tttatcaatgaactgccaggcaaaaagattattcgcatcgaccgctatgccaagtattta
ttgattcgcttgaatgataatttaacaattgtgtcgcacttacgcatggaaggaaagtat
catttaactacgccggaagtgcctaaagacaagcatgatcacgtagaatttatttttacc
gacggcactgccttgcgttataacgatgtgcgcaaatttggccgtatgcagctagttttg
accggaaccgagctacaaacaactggcatcggtaaactgggcgttgaacccaatacgccg
gaatttagtgagcagtattttttgtctagcttaaagagaaaaaagaagaacatcaaaaat
gtcttgctcgatcaaactgttgttgcaggtttaggcaatatctatgtggatgaaactttg
tggcaaagcaagatccatcccttgagtttggctaacaaaattcctgccgataaagtagaa
gatctgcgtaaaaatattaatgaaaccatcaaaattgccatagaaaagcgcggtacaact
gttcatagctatttggatgcaaacggcgaagttggtggttaccaagaaatgctacaagtt
tacggccacgccggtgaagcatgtcctagatgtggcacgactttggaaaagattaaggtt
tcaggaaggggcaccactttttgccctcattgtcaggtgatttataaatga

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