KEGG   Lactobacillus amylovorus 30SC: LAC30SC_08940
Entry
LAC30SC_08940     CDS       T01436                                 
Name
(GenBank) DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lai  Lactobacillus amylovorus 30SC
Pathway
lai03030  DNA replication
lai03430  Mismatch repair
lai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LAC30SC_08940
   03430 Mismatch repair
    LAC30SC_08940
   03440 Homologous recombination
    LAC30SC_08940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lai03032]
    LAC30SC_08940
   03400 DNA repair and recombination proteins [BR:lai03400]
    LAC30SC_08940
Enzymes [BR:lai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LAC30SC_08940
DNA replication proteins [BR:lai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LAC30SC_08940
DNA repair and recombination proteins [BR:lai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LAC30SC_08940
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like BRCT DNA_pol_B_exo1 DNApol_Exo
Other DBs
NCBI-ProteinID: ADZ07887
UniProt: F0TGP3
Position
complement(1740657..1741613)
AA seq 318 aa
MSIYVKNGILHVPGAQDKLRQKGQEIPDFLSNYTMLDIETTGLSPYRDRITELGAVKVRN
GQIVDQYTNLIKFPKNNKVPAFITKLNGITEEQIVNEGIPAEQAIKEFREFIDDDIIIGY
NVNFDLNFLYDLSQKYKLPILNNDYVDVLRLARAYYPRERHNRLIDCMQRAGIAQVEEHH
GLADSLDTIKVYNDFSAHFTDDLLEATRNKIKNVDLTGDDVDYIDLGFRNPVQNKNIVLS
GHIHMDEQDADKMIGNMGGKVEDKVNPMTNYLIMGDHDFFRKDNEDLNTARDLIKDGAKI
KRLSESFFLGMLDDWARS
NT seq 957 nt   +upstreamnt  +downstreamnt
atgagtatttacgtaaaaaacgggattctgcatgttcccggtgcccaagataagttgcgg
caaaaagggcaagaaatacctgactttttgtctaattacaccatgctggatattgaaacg
actggcctgagtccatacagagaccgcattacagaacttggtgcagtgaaggtcagaaac
ggccaaatcgttgaccaatatactaatttgatcaagttccctaagaacaataaggtgcct
gcttttattaccaaattgaatggcattactgaagaacaaatcgttaatgaggggattcct
gctgaacaagcgattaaggaattccgtgagttcatcgatgacgacattatcattggttat
aacgtcaactttgatctgaactttttatatgatttaagtcaaaagtacaagttgccaatc
ttaaataatgattacgtcgatgtgttacgcttagccagagcgtactatccacgcgaacgc
cacaatcgtttgattgactgcatgcagcgtgctggtatcgcgcaagtagaggagcaccac
ggtttagccgactcgcttgatacgatcaaggtctataacgactttagtgcgcacttcacc
gatgatttgcttgaagcgacacgtaacaagatcaagaacgttgatttaactggcgacgat
gtcgattacattgatctcggttttagaaatccggtccaaaataaaaacatcgttttatca
ggtcacattcatatggatgaacaagacgccgacaagatgattggcaacatgggtggtaag
gtcgaagataaggttaacccaatgaccaattatctgattatgggtgaccatgatttcttt
agaaaagacaacgaagatttgaatacggcacgtgatttgattaaagatggtgccaagatt
aagcgtttgtcagaaagtttctttttagggatgcttgatgactgggcacgaagttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system