KEGG   Lingula anatina: 106166008
Entry
106166008         CDS       T04921                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:5.6.2.6]
Organism
lak  Lingula anatina
Brite
KEGG Orthology (KO) [BR:lak00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:lak04054]
    106166008
Enzymes [BR:lak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106166008
Pattern recognition receptors [BR:lak04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   106166008
SSDB
Motif
Pfam: ResIII DEAD DED RIG-I_C Helicase_C RIG-I_C-RD SWI2_SNF2 Flavi_DEAD AAA_19
Other DBs
NCBI-GeneID: 106166008
NCBI-ProteinID: XP_013399861
UniProt: A0A1S3IPM6
Position
Unknown
AA seq 1008 aa
MAESKIRLKPYAKLRIRVCKELQTADFDFIKLALQDEIPAGELEEISNPQKLWNAMKKRN
LIEPNDVGFLKEIMEHIDRLDLVKVIEEYEEDRARNPELQAPDKDARYPEQVESPGEETA
KKEALPLHTASSDSQLQKSAKPSNRYHLLHSESSPGLSNANQPVIGSTGGQSPLLDVQGT
TGSQPGTRNIGASPLSPLNGNTSLTFSNHVESKETFPKQRVGFDGKVVNSSDGVGNFERP
QLPASLDSLSSQTARKPVYGDSEDLEEDSSCGASTAQAVFIGSEPVVEAAGEMTERNEGI
IRQASVPLEHLVQDGVPTKKKFSLRKYQRELANEAIEGTNTIICAPTGSGKTLTAAYISR
IRRSQVLKNGQKFKAVFIVCIRNLIQQQKDAFQTIFPPQDKIVGAISQTSDNLKTCLLNN
DIVMLTAQILVNDIKEGDVKITDFDLMIMDECHHTDLDHPYNMIMRLYMTEKKNREQRGE
STECLPQIIGLSASLGTGKGNNPLQHYYRVCANLDCFTISHVRNPVNEKELLCINPKPKT
DQIKLVQPRSSDNPFILMVKQMMEASEKEVSFPMELSKKFDKGSQGYENWVIENRNEAER
QALHTPEMRNTVITCRFLRDLNSALMLYDDLRGKDALEFLTKKILENDDRSIHSESPEVE
TKLKGRFMSQYRRLQSHCEAESPTSNKMLEELYRLLTEQFEKNPESRGIVLIRTREGCSA
LERCIQENVDQRLVRVGRMTGQSGDTSMTDVQQQKVIKAFKKGLAEPDGINLLVATDVAQ
EGLDIPKCNLMIRYNFVSNEIGSVQSKGRARAKESECYLIVPDGSINADREYKNMSKEHA
MLEALKDFDKLDPEEVRRNIKEKQNELWGRHLQAQAQSSARQSELEGSGVKVLCKECKAF
LCRGNFIIKKGGHYICVDLDFPKKIREEKIRRRDFRTDAQVGVSICRQTVTCGQSFGPVL
EYKQGSRRKGYTLSKDKIMLLYPGKEEPVQVKKWPSVCFNIVEESVSD
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggctgaatcaaaaatcagattaaaaccatatgcgaaattgcgtattcgtgtatgcaaa
gaactgcagacagcagactttgattttataaaattggcactgcaggatgaaatacctgcc
ggcgaattggaggagatttcaaaccctcagaagctttggaatgccatgaaaaaaaggaac
cttattgaacctaatgacgttggttttctcaaggaaattatggaacacatcgatcgactt
gatttggtaaaagtcattgaagaatatgaagaggatcgtgcgcggaaccctgaattgcaa
gcacctgacaaggacgcgagatatccagagcaagtggaaagccctggagaagagactgct
aaaaaagaggctctcccactacatacagcatcgtctgattctcagcttcagaaaagtgcc
aagccatcaaacagatatcatttgctccattcagagtcatctccaggcttatcaaatgcc
aatcaaccagtaataggtagcacaggtggacaatctcctcttttagatgtccaaggaaca
actggcagtcagccaggaactcgtaacattggtgcaagcccccttagccctttaaatggg
aacacaagccttactttctctaaccatgttgagagtaaagagacatttccaaaacagcga
gttggcttcgatggaaaagttgttaactcgtctgatggcgttggcaactttgaaagaccc
caacttccagcttctcttgatagtctgagttcacaaactgcacgcaagccagtgtatggt
gatagcgaagacttagaggaagattcttcatgtggtgcttctacagctcaagcagtgttc
attggtagtgaaccagtggtagaggcagcaggtgaaatgacagaaagaaatgaaggcata
atcagacaggcgtctgtccctctggagcatcttgtccaagatggtgtcccaacaaagaag
aaattttctttgcgtaaatatcagcgcgagttggccaacgaggccatagaaggtacaaat
accatcatctgcgccccaactggaagtggcaagaccctgactgcagcatatatctctcgc
atcagaagaagccaggtgctgaaaaatggccagaaattcaaagcagttttcatcgtttgt
attcgaaatctaatccagcagcaaaaagatgcctttcaaaccattttcccgccccaggat
aaaatagttggtgccataagtcagacttcggacaatttgaagacatgtttgttgaacaat
gacattgtgatgcttacagcacagattctcgtcaatgatatcaaagaaggagatgtgaaa
atcaccgatttcgacctaatgataatggacgagtgtcatcacacagatttggatcaccca
tacaacatgataatgaggttgtacatgacggagaaaaagaatcgagagcaaagaggggag
tctacagagtgccttcctcagattattgggctttcagcctcgctgggcactggaaagggg
aacaatcctctgcagcattattatcgggtctgcgccaatttagactgcttcaccatcagt
catgtgaggaacccagtgaatgaaaaagagctgctttgcattaaccccaaacccaaaaca
gatcagatcaaactggtacagcctcgttcgtctgataatcccttcatcttaatggtaaaa
caaatgatggaagcaagtgaaaaggaagtcagctttcccatggagttgtccaagaagttt
gataagggcagtcaggggtacgaaaattgggtcattgaaaatagaaatgaagccgagcgc
caagcgcttcatacacctgaaatgcgtaatacagtcataacttgtcgatttctgagagat
ctgaattctgctcttatgttgtacgatgacctgagaggaaaagatgccctggaattccta
acaaaaaagatactggaaaatgatgaccgcagtattcacagtgagtcacctgaggtagaa
acaaagttaaagggaaggtttatgagccagtatagaagactgcaatcccattgtgaggca
gagtctccaacatcaaataaaatgctggaagagttgtacaggctgctaactgaacagttt
gaaaaaaatccagaatctaggggaatcgttcttataagaaccagagaaggttgctctgcc
ttggagaggtgcattcaggaaaacgttgaccagagattggtgcgtgtggggaggatgacg
gggcagagcggagacaccagtatgaccgatgtccagcagcagaaagtgatcaaggccttc
aaaaaaggtctggctgaacctgatggaataaaccttcttgttgccacagatgtcgcgcag
gagggtttagacatcccaaaatgcaacttgatgattcggtacaactttgttagcaacgag
attggatcggttcagtcgaaaggccgtgcaagggccaaggagagcgagtgctatctcatt
gtgccagatggttcaatcaatgctgacagagagtataagaacatgtcaaaggagcatgcc
atgttggaggcactgaaagactttgacaaactggaccctgaggaagtgaggagaaatatt
aaggagaaacagaatgaactgtggggcagacatcttcaagcacaagcccaaagtagtgca
agacagtcagaactggaagggtcaggtgttaaagttctatgtaaagaatgcaaagctttt
ctgtgcagaggaaattttatcattaaaaagggaggtcactatatatgtgtagatctagac
tttccaaagaagattagagaggaaaaaataagaagaagagactttagaacagatgcacaa
gttggtgtgtcaatttgcagacagactgtcacctgtgggcagtcttttgggcctgtacta
gaatacaagcaaggctcacgtaggaaaggctacaccctctccaaggacaagattatgctg
ctctacccagggaaggaagagccagtacaagtgaagaaatggccttcggtttgtttcaat
atagttgaagaaagtgtcagtgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (37)   

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