KEGG   Lacimicrobium alkaliphilum: AT746_02290
Entry
AT746_02290       CDS       T04189                                 
Symbol
dksA
Name
(GenBank) RNA polymerase-binding transcription factor
  KO
K06204  RNA polymerase-binding transcription factor
Organism
lal  Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:lal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lal03000]
    AT746_02290 (dksA)
   03021 Transcription machinery [BR:lal03021]
    AT746_02290 (dksA)
   03009 Ribosome biogenesis [BR:lal03009]
    AT746_02290 (dksA)
Transcription factors [BR:lal03000]
 Prokaryotic type
  Other transcription factors
   Others
    AT746_02290 (dksA)
Transcription machinery [BR:lal03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     AT746_02290 (dksA)
Ribosome biogenesis [BR:lal03009]
 Prokaryotic type
  rRNA transcription factors
   AT746_02290 (dksA)
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR DZR RsdA_SigD_bd
Other DBs
NCBI-ProteinID: ALT00280
UniProt: A0A0U2ZMQ8
Position
484272..484721
AA seq 149 aa
MPTEISQKSLGLLALAGLSPYQEKDGEEYMNDAQLEHFSLLLKAWRDQLRAEVDRTVHHM
QDEAANFPDPVDRAAQEEEFSLELRTRDRERKLIKKIEKTLKRIDDDDFGFCDSCGIEIG
VRRLEARPTADMCIDCKTMAEIKEKQMQG
NT seq 450 nt   +upstreamnt  +downstreamnt
atgccaacagaaatttcacaaaagtcacttggtttactggcccttgccggtctgtctccc
taccaggagaaagacggcgaagaatacatgaacgatgctcaactggagcatttcagcctg
ttgcttaaagcctggcgcgatcagttacgggcagaggtcgaccgaacggtgcaccatatg
caggatgaggccgctaactttccggaccctgtggatcgtgccgcacaggaagaggagttc
agtctggagctgcgcacccgggatcgtgagcgtaagctgatcaagaagatcgaaaagact
ctcaagcgtattgatgatgatgatttcggattctgcgattcctgcggcattgaaatcggc
gtacgccgcctcgaagccagacctacagctgatatgtgtatcgactgtaaaaccatggcg
gaaatcaaagagaaacaaatgcagggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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