KEGG   Lacinutrix sp. 5H-3-7-4: Lacal_0553
Entry
Lacal_0553        CDS       T01533                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
lan  Lacinutrix sp. 5H-3-7-4
Pathway
lan00300  Lysine biosynthesis
lan00550  Peptidoglycan biosynthesis
lan01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lan00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Lacal_0553
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Lacal_0553
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lan01011]
    Lacal_0553
Enzymes [BR:lan01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Lacal_0553
Peptidoglycan biosynthesis and degradation proteins [BR:lan01011]
 Precursor biosynthesis
  Amino acid ligase
   Lacal_0553
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase CbiA MobB YqeC DUF3440 SRP54 KTI12
Other DBs
NCBI-ProteinID: AEH00404
UniProt: F6GD91
Position
complement(608095..609558)
AA seq 487 aa
MTSLIDILYKVTINAVVGTTNVYVRNIHFNSRSVAVNDLFVAIKGSVVDGHDYIENAIKQ
GAIAVVCEYLPKTLKEGISYIVVEDSSIALAIMASNYYGNPSSNLKLVGVTGTNGKTTIA
SLLFQLFKKAGYKVGLLSTVVIKVDNKDYKATHTTPDSLTINRYLSEMNNEGVEFCFMEV
SSHGIHQKRTQGLDFAGGIFTNLSHDHLDYHETFAEYRDVKKSFFDNLSSSAFALTNADD
KNGAIMLQNTKAKQYKYGLKNYANYKAQILENSFSGMLLKINDSDVWTRLIGGFNASNVL
AIYATAELLGLEKTEILRLISELESVSGRFQYLISEENITAIVDYAHTPDALKNVLETIN
SIRTKNEELITVIGCGGDRDATKRPKMGHIASALSTKAIFTSDNPRTEVPELIIEDIEKG
VEPQNFKKTLSIVDRKQAIKTACQLANAGDIILIAGKGHETYQEINGERTDFDDFKIVKN
LLKQLQK
NT seq 1464 nt   +upstreamnt  +downstreamnt
gtgacatcattaatagacatattatataaagtaactatcaatgcagtagttggtaccaca
aacgtgtatgtgagaaatattcattttaactcgcgtagcgttgctgtaaacgatttgttt
gtggcaattaaaggaagtgttgtagatggtcacgattatatagagaatgcaataaagcaa
ggagcaattgctgtggtttgtgagtatttaccaaaaactttaaaagaaggtattagttat
atagttgttgaagactctagtattgctttagcaataatggcttcaaattattatggcaat
ccatcttctaatttaaaattagtgggagttactggaacaaatggtaaaacgactatagca
tcactgttgtttcaattatttaaaaaggcaggatataaagttggcttgctttcaacggta
gtaataaaagtagataataaggactataaagctacgcatacaacgccagattctctaact
ataaatcgctatttaagtgagatgaataacgaaggtgttgagttttgttttatggaggtg
agctcgcatggtattcatcaaaaaagaactcaaggtcttgattttgcaggtggtattttt
acaaatttatcacatgatcatttagattatcatgaaacgtttgcagagtatcgcgatgtt
aaaaaatcctttttcgataatttaagtagtagtgcttttgcattaacaaatgccgatgat
aaaaacggagcaattatgcttcaaaacacaaaggcgaagcagtataaatacggtttaaaa
aattatgcaaattataaagctcaaatactagaaaactcatttagtggcatgttgttaaaa
attaacgatagcgatgtgtggacaaggttaataggtggttttaatgcttcaaacgtattg
gctatatacgccactgctgaattattaggattagaaaaaaccgagattttaagactcata
agcgagctagaaagtgtaagtgggagatttcaatatttaatttctgaagaaaatattaca
gcgattgtagattatgcacatacgccagatgctttaaaaaatgtgttggaaaccattaat
agtattcgcaccaaaaatgaagaattaataactgttattggttgtggtggagatagagat
gctacaaaaagaccaaaaatgggacacattgcttcagcgttaagcacaaaagccattttt
acaagtgataacccaagaacagaagtgcctgagttaattattgaagatattgagaaaggt
gtagaacctcaaaattttaaaaaaaccttatcaattgtagatagaaaacaagctataaaa
acagcttgtcaattagcaaatgctggtgatattattttaatagcaggaaaagggcatgag
acttatcaagaaataaatggtgagcgaacagattttgacgattttaaaatagttaaaaat
ttattaaaacaattacaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (65)   

Download RDF
DBGET integrated database retrieval system