KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109347457
Entry
109347457         CDS       T04664                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109347457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109347457
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     109347457
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT DUF4845
Other DBs
NCBI-GeneID: 109347457
NCBI-ProteinID: XP_019442868
Position
LG05:complement(2641183..2657420)
AA seq 853 aa
MNVDHNQPHTNSHTLQTLTTAPISSSISNLSSSDRDFKFYTNFNEFKLPVNEISKESQFM
LQSIGASIAKDSAFPVDVDEAYDWVVDVNDDVLERFDISADEFRKVRMDEEEVVVREGAN
SAMEDDGFTLVCRNKKKNGGRNYDSSEKVVIDSETSVKVTMKDKKTIGPKSKVPFHIPTI
RRPQDEYTIMVNNSNMPFEHVWLERSGDGQRVIHPLEKLSVLDFVDKEPGNVVPVKPPPL
ESTPFRLVEDVKSLKELAAKLRSAHEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTL
KLRVHVGPYLREVFKDPAKRKVMHGADRDVVWLQRDFGIYICNLFDTGQASKVLKLERNS
LEYLLRHFCEITANKEYQNADWRVRPLPDEMLRYAREDTHYLMYIYDLMRIDLFALSKKS
ESSDDSLLEVYEHSYDVCMQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDI
VARSVDESTGYILPNKAVLEIAKQMPVTTIKLLRLVKSKHPFVERNLDSVLEIIKHSIQN
AAAFEEAAQQLSEGNASTSSDVVPVKDRTEDPQLHTQDSKESSQHQDINVLVKIKSPSFT
LSKAKENRGSIEVLKQPTGAFGALLGSSASKRKLNPENKDNEDVKLQQFRSSVNLPFHSF
LGGTQVSKPVVKSPSLASETSNPQKPVPVHVSTSTLDEIIILESDTAVEDMEQNNVENSN
DHREINSNVSTSGKEDEVEPMSLSELSSSFQKCFQSNNQNIKTRLLKKTEQVGGLLQLKP
FDYEEAMKHVKFGENKKHASFQNDGDVGRDDSGSKKKHSTTGQEQTTDLTKQLQQGRRRQ
AFPASGNRSATFR
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgaacgttgatcacaaccaacctcacacaaattcacacactctacaaaccctaacaaca
gctccgatttcctcttcaatttcaaacctctcttcttccgatcgtgatttcaaattctat
accaatttcaacgaattcaagctccctgttaacgaaatctcgaaggaatcacagtttatg
cttcaatcaatcggtgcttcaatcgcgaaggattcagcattccctgttgatgtagacgag
gcttatgattgggttgtggatgtaaacgacgacgttttggagcgatttgatatctctgct
gacgagtttcggaaggttaggatggatgaggaggaagtggtagtgcgtgaaggggcgaat
tcggctatggaagatgatggttttacgttggtttgtaggaataagaagaaaaatggaggg
aggaattatgattcttcggagaaagtggtgattgattcggagacaagtgttaaggttaca
atgaaggataagaagacgattgggccgaaatcgaaggttccgtttcatataccgacgatt
aggaggcctcaggatgagtataccataatggttaataattcaaacatgccttttgagcat
gtctggttggagaggagtggtgatggtcagagggttattcatccattggagaaactctca
gttttggattttgttgataaggaacccgggaatgttgtgccagtgaaacctcccccatta
gagagcacccctttcaggcttgtggaggatgtcaaaagtttgaaggagttggctgctaag
ctgcgttctgctcatgaatttgcggttgacttggaacataatcaatatcgttctttccaa
ggtttgacttgcctgatgcaaatctcaacaaggactgaagattttgttgtagacactttg
aaacttcgcgttcatgttgggccctacctaagggaagtgttcaaagaccctgcgaagagg
aaggtcatgcatggtgcagatcgagatgttgtgtggcttcaacgagattttggcatttac
atttgtaatctgttcgacactggccaggcttcaaaggtgttaaaattggagagaaatagt
ttggagtatcttctgcgtcacttctgtgagattactgcaaacaaagagtaccagaatgca
gattggagagtacgacctcttcctgatgagatgctaagatatgccagagaagatacacat
tatcttatgtatatatatgatttgatgaggattgatttatttgcattgtctaagaagtct
gaaagttctgacgattctctgttggaggtttatgagcacagttatgatgtctgcatgcag
ctctatgagaaagaacttctgacagagaactcctaccttcatatatatgggttgcaagga
gctggttttaatgctcagcagcttgccattgtttctggtctctgtgaatggcgggacatt
gtcgcgcgttcagtggatgagagtactggatatatactgccaaataaagctgttcttgaa
atagctaagcagatgcccgtgactacaatcaaactactgcgtttggtaaagtcgaagcac
ccctttgttgaacgcaatcttgatagtgtccttgagatcattaagcattctattcaaaat
gctgctgcctttgaagaagctgctcagcaattgagtgaaggaaatgcttctacttcatca
gatgttgtaccggttaaagatagaactgaagacccccaactccatacacaagactcaaag
gaatcctctcagcatcaagatataaatgtcctagtaaaaattaagtcccctagtttcaca
ctctcaaaagcaaaggaaaatagaggaagtattgaggtgctaaaacagcctactggtgct
tttggcgcactgctggggagttcagcttccaagaggaagcttaatcctgaaaacaaggac
aacgaagacgtcaaactacagcagtttagatcttcagttaatcttcctttccattcattt
ttgggtggcactcaggtatcaaaacctgttgtaaaaagtcctagtttggcatcggaaaca
tcaaacccacaaaaacctgttccagttcatgtttccacctccactttagatgagattata
attctagagtcggatacagctgtggaggatatggagcagaataacgtagaaaactctaat
gatcacagagagataaattccaatgtgtccacttcgggaaaagaggacgaagttgagcca
atgtctctttccgaattgtcatcgagctttcagaagtgctttcagtcaaacaatcaaaat
atcaaaacaagactgctcaagaaaactgaacaagttggtggcttattgcagctgaagcca
tttgattatgaagaggcaatgaaacatgttaagtttggagaaaacaaaaaacatgcatca
ttccagaatgatggtgatgtgggacgagacgactcgggtagtaagaagaaacattcaaca
acaggacaagaacaaacaactgatttgacaaaacaattgcagcaaggtagaagacgtcag
gcatttccagcatctgggaatcgaagtgcaacgttccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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