KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109351615
Entry
109351615         CDS       T04664                                 
Name
(RefSeq) probable NOT transcription complex subunit VIP2
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109351615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109351615
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109351615
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109351615
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 109351615
NCBI-ProteinID: XP_019448671
Position
LG07:complement(1703383..1710275)
AA seq 652 aa
MSGLLNSSLNGSASNHPDGAGRSFATTFSGQSGAASSAFHHSGANQGLHIIHGSFNVPNM
SSTLTSRNSIINNIPPGGVQQPTGNLSSGRFASNNLPAALSQLSHSGVTNRGGISVGNPG
FGSSTNGVGGSIPGTLPTSAAIGNRNAVPGLGVSQFLGNAGPQITSSVGNMVGGNIGRNG
GGLSMPGFASRLNLSTNSGSGGLGVQGQSRLMSGVLPHGSPQVISMLGNSYPSAGGPLSQ
SHVEAGSNLNSMGMLNDMNTNDSSPFDINDFPQLTSRPSSAGGHQGQLGSLRKQGIGIGP
IVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSADFS
SGGTYSSHRAQQQQHASSVSSGSVPFSPVNKQDLLHLHGSDIFPSSHSNYQSQSGPPGIG
LRPPSSANAISGMGSYDQFIQQYQQHQNQPQFRLQMSTVNQSFRDQGMKSTQTTQSTPDP
FGLLGLLSVIRMSDPDLTSLALGVDLTILGLNLNSTENLHKTFGSPWFDEQAKGDPEINV
PQCYYAKQPPDLHQGYFLKFSLETLFYIFYSMPKDEAQLYAAYELYSRGWFYHKLHHLWL
IRVPNMEPLVKTATYERGSYHCFDPTTFETVRKDNLVLHYEMVEKRPLISQH
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgtcagggttacttaattcttctctgaatggatctgcttcgaaccatccagatggtgct
gggaggtcttttgctacaacgttctctggtcagtctggtgcagcctcctctgcttttcat
cacagtggagctaaccaaggattgcacattattcatgggagcttcaatgttcccaatatg
tccagtacactcacatcaagaaactcaataataaataacattccacccgggggcgttcag
caacccaccggtaacctttctagtggaagatttgcatccaacaacctccctgctgcactg
tcacagctatctcactctggagtcacaaatagagggggtataagtgtaggaaaccctgga
tttggtagtagcacaaatggagttggcggttctattcctgggactcttccaacatctgct
gcaattggtaaccggaatgctgttccaggattgggagtatcccaatttctaggaaatgca
ggccctcaaatcacaagttctgttggaaatatggtaggaggtaatattggaagaaatggt
ggggggttgtccatgcctggctttgcttctcgtctaaacttgagtacaaacagtggatct
ggtggccttggtgttcagggacagagccgtttaatgagtggtgtgctcccacatggatct
ccgcaggtaatttcaatgctaggaaattcttaccctagtgctggaggcccgctttcccaa
agccatgttgaagcaggaagtaacttgaactctatggggatgttgaatgatatgaatacc
aatgacagttcaccttttgacatcaatgactttcctcaactgacaagtcggcctagttcc
gctggaggacatcaagggcagttgggttctttaagaaaacagggtattggtattggtcct
attgttcaacaaaaccaagagtttagtattcaaaatgaagacttcccagccttacctgga
ttcaaaggtggtaatgcagattatgcgatggatatgcaccagaaagagcaacttcatgat
aatgctgtgccaatgatgcaatcgcagcatttctctatggggaggtctgctgattttagt
tcggggggaacatattcatctcatcgtgctcaacagcagcagcatgcttcttcagtgagt
agtgggagtgtccctttttcacctgtgaacaagcaggatcttctccatctacatgggtca
gatatttttccatcttcacactcaaactatcaatcacagagtggacctccaggcattgga
ttaaggcctccaagttctgcaaatgcaatttctggtatgggttcatacgaccagttcatt
cagcaatatcaacagcaccagaaccagccccagttccgccttcaaatgtcaactgtaaat
cagtcttttcgggatcagggaatgaagtctacacaaactacacaatctacaccagatcca
tttggtttgcttggtttgttaagtgtgatcaggatgagtgatcctgacttgacatctctt
gctcttggagttgatcttactatacttgggttaaatttgaactcaaccgaaaatcttcac
aagacttttgggtctccttggtttgacgaacaagctaagggtgatccggagattaatgta
ccacaatgttactatgctaaacaaccacctgatctacatcaaggttactttttgaaattt
tcgttggaaacattgttttacatattttacagcatgcccaaagatgaagcacaactttat
gctgcatatgagctttacagcagaggttggttttatcacaagctgcatcatctatggctt
ataagagttcccaacatggagccacttgttaaaacagccacatacgagagaggatcatat
cactgctttgatccaaccacatttgaaacagtccgcaaggataatcttgttcttcattat
gaaatggttgaaaagagaccacttatttctcaacattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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