KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109360199
Entry
109360199         CDS       T04664                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:lang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lang03009]
    109360199
Enzymes [BR:lang01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     109360199
Ribosome biogenesis [BR:lang03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    109360199
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB FtsJ Met_10 Methyltransf_31 Methyltransf_15 Methyltransf_25
Other DBs
NCBI-GeneID: 109360199
NCBI-ProteinID: XP_019460465
Position
LG11:221216..227762
AA seq 538 aa
MSQLLYISLPLTPLSSSSSSLSSSSSSSSSSSNLNSQPLKLTHITRSSISSTPKGAPNRL
LKTHKLNLEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTREL
SHHDLRLVTDIVGGTIRWRRYLDHLISSLCHDKDISSMEPLLLQILRIGFYEIVKLDMPP
YAVVDENVRLAKVALRSGAGNMVNGILRKLVVLKENETLPMPKVEGDDRAQARALATLYS
HPVWIVRRWTKYLGQEETIKLMTWNNSEPSFSLRANCARGFSRDDLVSELNTLKVPHKLS
SHLDEFVRVKTGLQSVIQAGLLKKGLCSVQDESAGLIVSVVDPQPGETIIDCCAAPGGKT
LYMASRLSGQGMVFAIDVNRGRLRILKETAKLHQVDGVVTTINADLRTMTDIEPLKSNKV
LLDAPCSGLGVLSKRADLRWNRKLEDMEELKNLQDELLDAASKLVKPGGVLVYSTCSIDP
EENDERVAAFLERHPDFHIDPVDKYVSADFVTQSGFYFSNPVKHSLDGSFAARLVRAL
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgtcgcagctgctctacatttctctgccattgacacctttatcttcttcttcttcttct
ttatcttcttcttcttcttcttcttcttcttcttccaacctgaactcacagccattgaag
cttacccacataactcgcagctccatttcctccactcccaaaggtgctcccaatcgtttg
ctcaaaacccacaagttgaacttagaggtttctcctcatagagctgtgtcagcagtgaga
ttgatgagaatagagctaggtggtgcatttgctgaccttctcaatgagaaaggcaaaggt
tctggtgagaacgagatgggatatgtccaaagaactcttggttttcgcacccgtgaatta
agtcatcacgatcttagattggttactgacattgttgggggtacaattcgttggagaaga
tatcttgatcatctcatcagttcactatgtcatgataaagatatatctagcatggaacct
cttctcttacagattttacgaattggcttctacgagattgtcaaattagatatgccacct
tatgctgttgtagatgagaatgtgaggcttgccaaagtcgctctcagatctggtgctggc
aacatggtcaatggaatcctcagaaagctagtcgtgcttaaggaaaatgaaactctcccc
atgcctaaagtggagggcgatgaccgtgctcaagcacgtgctctggcaaccctgtactca
catccagtttggatagtaaggagatggacgaaatatctgggccaggaagaaaccattaaa
ttgatgacatggaacaacagtgaacccagtttcagcttaagagcaaactgtgcaagaggc
ttttcaagagatgaccttgtgtcagagctgaatacattgaaggtcccacacaagctttca
tcacatttggatgaatttgttcgtgtgaaaaccgggttgcagagtgtcattcaagctggt
cttctaaaaaagggtttatgttcagttcaggatgagagtgcaggtctgatagtttctgtt
gttgatcctcaacctggtgaaactataattgattgttgtgctgctcctggtggaaaaacc
ctgtacatggcctctcgtctaagcggccaaggtatggtgtttgcaattgatgtgaatcgt
ggtaggttgagaattctcaaagagacagcaaagttacaccaagtagatggtgttgttact
actatcaatgcggatcttcgtacaatgactgatatcgaaccacttaagagcaacaaagtt
ttgttggacgctccgtgctctggactcggtgttctttccaagagagctgacttgcgttgg
aacaggaagctggaggatatggaagaactgaaaaatttacaggatgagctcctcgatgca
gcatccaaattagtaaaaccaggtggagtgttagtttacagtacatgctccatagatccc
gaagagaatgatgagagggtagctgcatttcttgaaagacatccggattttcacattgat
cctgttgacaaatatgtttcagctgattttgtgactcaaagtggtttctatttttcgaac
ccagtaaaacattcactggatgggtcctttgcagctcgtttggtgcgagctttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system