KEGG   Lentibacillus amyloliquefaciens: AOX59_06755
Entry
AOX59_06755       CDS       T04204                                 
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lao  Lentibacillus amyloliquefaciens
Pathway
lao03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AOX59_06755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lao03400]
    AOX59_06755
Enzymes [BR:lao01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AOX59_06755
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AOX59_06755
DNA repair and recombination proteins [BR:lao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AOX59_06755
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Auto_anti-p27 NFACT_N
Other DBs
NCBI-ProteinID: ALX48334
UniProt: A0A0U4FI95
Position
complement(1335290..1336120)
AA seq 276 aa
MPELPEVETIKNTLKRFVIDKTITDVSVFWPNIIKQPDDIDHFKHLLTEQSIRDIHRRGK
FLLFELDDAVLVSHLRMEGKYSVHPSAEPLKKHTHVIFKFNNGEELRYNDVRKFGTMHLF
KKGDERNNKPLNQLGPDPFDEAFTLDYFYQKLKKTDRVIKSVLLDQAVVAGLGNIYVDET
LFKAHIHPLKKANKLKKREAKAIWEAAIHTLKEAVAQGGTTIRSYVNSQGDMGMFQQELF
VYGHENEPCKTCGNPVVKMKVGGRGTHVCVSCQKMK
NT seq 831 nt   +upstreamnt  +downstreamnt
atgccggaattaccagaagtcgagacgataaaaaatacactcaaacgatttgtaatcgat
aaaaccattacggatgtatctgtattttggccgaatatcattaaacagcccgatgatatt
gatcattttaaacaccttttaacggaacaatcgattcgggatatacaccggagagggaaa
tttttgttgtttgaactggatgatgctgttttggtatcccatttgcggatggaaggcaag
tacagtgttcatccgtcagcagaaccgttaaaaaaacatacacacgtcatttttaaattt
aataacggggaagaactccgctacaacgatgtgcgcaaattcgggacgatgcatctattt
aaaaaaggagatgaacggaacaataaaccgctgaaccaacttggcccggatccgtttgat
gaagcatttacgctggattatttttaccagaagctaaaaaaaaccgaccgtgtcatcaaa
tcggtattgttggatcaggcggttgttgccggtttgggaaatatttatgttgacgaaaca
ttgtttaaagcacatattcatccgttgaaaaaagcgaataaattgaagaaacgagaagca
aaagcgatttgggaagcagcgatacacaccttgaaagaggcggttgcccagggaggaacc
acgattcggtcgtatgtcaattcccagggcgatatgggaatgtttcagcaggagttgttt
gtttacggccatgaaaacgagccatgcaaaacatgcggcaaccccgttgtgaaaatgaaa
gtcggcggacggggaactcatgtctgtgtttcatgtcaaaaaatgaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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