KEGG   Labrenzia sp. CP4: ACP90_26320
Entry
ACP90_26320       CDS       T04295                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
lap  Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:lap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lap03032]
    ACP90_26320
   03400 DNA repair and recombination proteins [BR:lap03400]
    ACP90_26320
Enzymes [BR:lap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ACP90_26320
DNA replication proteins [BR:lap03032]
 Prokaryotic type
  DNA Topoisomerases
   ACP90_26320
DNA repair and recombination proteins [BR:lap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ACP90_26320
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: AMN55318
Position
5719243..5721696
AA seq 817 aa
MSDTSTPESSPTPETNGGAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVV
DNAIDEALAGHADHVTVTLNPDGSVTVSDNGRGIPTDLHSEEGVSAAEVIMTQLHAGGKF
DQNSYKVSGGLHGVGVSVVNALSTKLELRIWRNGEEHSMTFSHGDAQAPLKVVGPANGRK
GTEVTFLPSPETFTKTEFDFSTLEHRLRELAFLNSGVRIILTDKRGVEDKVEELFYEGGL
EAFVRYLDRAKHPLIEEPINMRAERDGITVEAAMWWNDSYHEHVLCFTNNIPQRDGGTHL
AGFRAALTRQVTGYAEATGLMKKEKVNLSGDDCREGLTCVLSVKVPDPKFSSQTKDKLVS
SEVRPVVENLISQILSEWLEENPAPAKTIVSKVVEAASAREAARKARELTRRKGALDIAS
LPGKLADCQERDASKAELFLVEGDSAGGSAKQGRHRENQAVLPLRGKILNVERARFDKML
SSNEIGTLITALGTGIGKEEFNVEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELI
ENGYIYIAQPPLYKVKRGQSEQYLKDQKALEDYLIGQGLDEASLTLANGEVRTGQDLRAV
AETARTISDIFDGLHSRYNRDVVEQAAIAGALTPEILDDQGKAEEAAAYIARRMDILADE
FERGWTGEARDDGSLVFKRMVRGVQEAATIDAALLGSTDARRLAAHAAHLNEIYGKAAVL
RRKDISTEIRGPRALLSQIYAAGQKGISLQRYKGLGEMNPEQLWETTLDPNVRSLLQVKV
READDADDIFTKLMGDEVDPRREFIQENALAVANLDI
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgagcgacacgtccacgcctgagagcagcccgacccccgaaaccaatggcggtgccgaa
tatggcgccgacagcatcaaggtcctcaagggcctcgatgccgtgcgcaagcggcccggc
atgtatatcggcgacaccgatgacggctccggtctgcaccacatggtctacgaggtggtc
gacaacgccatcgacgaagcgctggccggccatgccgaccatgtgaccgtgacgctcaac
ccggacggatcggttacggtatccgataacggccgcggaattccgacggacctgcactcg
gaagaaggcgtgtcggctgccgaggtcatcatgacccagctgcatgcgggcggtaaattc
gaccagaactcctacaaggtctccggcggattgcacggcgtgggcgtttccgtggtcaat
gcactgtcgacaaagctggaactgcgcatctggcgcaacggcgaagaacactccatgacc
ttctcccatggcgatgcccaggcaccgctcaaggtggttggcccggccaacggtagaaaa
gggaccgaggtgaccttcctgccgtcaccggaaaccttcacaaagaccgagttcgatttc
agcacgcttgaacaccggctgcgtgagctggccttcctcaactccggcgtccgcatcatc
ctgacggacaagcgcggcgttgaggacaaggttgaggagctgttctatgaaggcggcctg
gaagcgttcgtgcgctatctggaccgtgccaaacatccgttgatcgaagagccgatcaac
atgcgggccgagcgtgacggcatcacggtcgaagccgccatgtggtggaacgacagctat
catgagcatgtgctgtgcttcaccaacaacattccgcagcgcgatggcggtacccacctt
gccggtttccgggctgcgctgaccaggcaggttaccggctatgcggaagcaaccggcctg
atgaaaaaggaaaaggtgaacctttccggcgatgactgccgcgaaggcctgacctgcgtt
ctttccgtcaaggtgccggatccgaaattctcgtcccagaccaaggacaagctggtttcc
tccgaagtgcgtccggtggtcgaaaacctgatctcgcagatcctgagcgaatggcttgag
gaaaaccccgccccggccaagacgatcgtctccaaggtggtggaagcggcctccgcacgt
gaagccgcccgtaaggcacgcgagctgacgcgccgcaagggcgccctcgacatcgcctcc
ctgcccggcaagcttgccgattgccaggagcgcgacgcctccaaggccgaactcttcctg
gtggagggtgattccgcaggcggctcggccaaacagggccgtcaccgcgaaaaccaggcc
gtgctgcctctgcgcggcaagatcctcaacgtggagcgggcacgcttcgacaagatgctg
tcctcgaacgaaatcggcacgctgatcacggcgcttggaaccgggatcggcaaggaagaa
ttcaacgtcgagaagctgcgctatcacaagatcatcatcatgacagatgctgacgtggac
ggcgcgcacattcgcacgctgcttctgacgttcttcttccgccagatgccggagctgatc
gaaaacggctacatctatattgcgcagccaccgctctacaaggtcaagcgcggccagtcc
gagcagtacctgaaagaccagaaggcgctggaagactatctgatcggacagggtctggac
gaagcttcgctgacgcttgccaacggcgaggttcgcaccggccaggaccttcgtgccgta
gccgaaaccgcacggaccatttccgacatcttcgacgggttgcattcacgctacaaccgc
gatgttgtcgaacaggccgcgattgcgggtgcattgacaccggagatcctggacgatcag
ggcaaggctgaggaagctgccgcctatatcgcccgccggatggacattctggccgacgaa
ttcgaacggggctggaccggcgaagcgcgggacgacggcagccttgtgttcaaacggatg
gttcgcggcgtgcaggaagccgccacgattgacgctgccctgctcggctccacggacgca
cgccgtcttgcagcacacgcagcccatctgaacgagatctacggcaaggccgccgtcttg
cggcgcaaggatatctcgacggaaattcgggggcctcgcgccttgctaagccagatctac
gccgccggccagaagggtatctcgctgcagcgctacaagggtctcggcgagatgaacccg
gaacagctctgggaaacgacgcttgacccgaatgtccgctccctgctgcaggtgaaggtg
cgcgaggcggacgacgccgacgacatcttcaccaaactgatgggagacgaggtcgatcca
cggcgcgaattcatccaggaaaacgccctggccgtggccaacctcgacatctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (81)   

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