KEGG   Candidatus Liberibacter americanus: lam_1047Help
Entry
lam_1047          CDS       T02902                                 

Gene name
nei
Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lar  Candidatus Liberibacter americanus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lar00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    lam_1047 (nei)
Enzymes [BR:lar01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     lam_1047 (nei)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     lam_1047 (nei)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1193209..1194093
Genome map
AA seq 294 aa AA seqDB search
MPELPEIETIRRNLTPIMENMLLTELCLHRKNLRFDFPENFSSLVKNKKIIRVSRRAKYF
IIELEGDMSIIVHLGMSGSFIVESKTTSTIINKNIIKDPRHNHVIISIENDDKTLKYRII
YNDPRRFGFMDLAKTSLIEKYPPFAKMGPEPIDINFNTEYLTNQFYKRKSSIKNALLNQQ
IVSGLGNIYVCEALWRAKLSPMQNVKSLAQENISTNFKLSKLIEEIRNVLFDAINAGGSS
LRDYIHADGSIGRFQNSLAVYGRTGEACPANCGQFISRIVQSGRSTFYCSHCQQ
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattgccagaaatagagacaattagacgcaatcttactccaattatggaaaat
atgctattaactgaactgtgtttgcatagaaagaatcttcgttttgatttccctgaaaat
ttcagctcattggtcaaaaataaaaaaattataagagtttccagacgagccaaatatttt
ataattgaactggaaggagatatgtcaattattgtgcatcttggaatgtcaggatcattc
atagtagaaagtaaaacgacttcaactatcataaataaaaatataatcaaagatcctaga
cacaatcacgtaataatctcgattgagaacgatgataaaacactgaaatatagaattata
tataacgatcctcgtcgttttggattcatggatttagcaaaaactagcttaatagaaaaa
tatcctccatttgcaaaaatgggaccagaaccaatagatataaattttaataccgaatac
ttaacgaatcaattttacaaaagaaaaagcagcattaaaaacgcattacttaatcaacaa
atagtatcaggacttggtaacatttatgtttgtgaagcgctgtggcgagctaaattatct
cctatgcaaaacgtaaaaagcctagcacaagaaaacatatcgacaaattttaaactatct
aaattgattgaagaaattagaaatgttcttttcgatgccataaatgctggaggatcttct
ctacgtgattatatacatgcagacggatcaattggacgtttccagaattcattagctgtc
tatggcagaacaggagaagcttgtcctgcaaattgtggacaatttataagtcgaatcgtg
caatcaggacgatctactttctactgctcacattgtcagcaataa

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