KEGG   Loxodonta africana (African savanna elephant): 100671839
Entry
100671839         CDS       T04351                                 
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X2
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100671839 (POP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lav03009]
    100671839 (POP1)
   03016 Transfer RNA biogenesis [BR:lav03016]
    100671839 (POP1)
   03029 Mitochondrial biogenesis [BR:lav03029]
    100671839 (POP1)
Enzymes [BR:lav01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     100671839 (POP1)
Ribosome biogenesis [BR:lav03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     100671839 (POP1)
Transfer RNA biogenesis [BR:lav03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    100671839 (POP1)
Mitochondrial biogenesis [BR:lav03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    100671839 (POP1)
SSDB
Motif
Pfam: POP1_N POPLD
Other DBs
NCBI-GeneID: 100671839
NCBI-ProteinID: XP_003408457
Position
Unknown
AA seq 1017 aa
MSNAKERKHAKKMRNQPTNVTLFSGFAANRGGKHHNGGGKPAQTQKQESHSGTSQQQETK
VTHHSLSDPDVNEQSSSKVMFRKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLK
AVTQKSSNSMVFQTLPRHMRRRAMSHNVKRLPRRLREIAQKEAEKAVHQKKEHSKNKCHK
ARRCHKNQVLEFNRRQKKNMWLETHIWHAKRFHMVKKWGYCLGERPTVKSHRACYRAMTN
RCLLQDLSYYCCLELKGKEEEILKALSQMCSIETGLTFAAVHCLSGKRQGSLMLYRANQY
PREMLGPVTFIWKSQRSPGDASESRQLWIWLHPTVKQEILEEIKAVCQCMEPIKSTVCTP
DPLLTPPQEKSQTELPDEKIGKKRKHKDGGENAIPVKKFIGDATRDPQQPCSWVSPATGI
VISDLTMEMNRYRLIGPLSHSVLTEALKAASVHTDGEDTETTPHCWWIETCRNPDNVSLH
HRQEDFFELLRGITSPGEIPAGTILGLTVGDPRINLPHKRSKALPDPEKCQDNEKARQLL
LEGVPVECTHSFIWNQAICKSVTENKISDQDLNRMRSELLVPGSQLVLGPQESKIPILLI
QQPGKVTGEDRRGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKEGLVHSQYKRSPNIP
GDFPDCPAGIRFAEEQAKNLLEKYKRRPPAKRPNYVKLGTLAPFCCPWVQLTQDWESRVQ
AQEESSVASSPSGEEGDTRRREVPCAATPEKTLKLSVNEPIEPEEAMDTECQGQAGTKRV
GDQDAVENNGAATGRLCVIRERKLLKQLSAWCGPSSGGSRAARRAPGRGQQDLTRETYLS
VLGHFPRGLVWVSLSLLRKGSPEPHTMICVPAKEDLLRLSQDRLYFGPQEPKHSDPFKSK
VLKQKEKKKMEKRQRRGSAAPEGLAGEDPTAGHEALTLGLWAGPLPAVTSHCSRVLLGFV
TQGDFSMAVGCGEALGFVSVTGLLDMLSRQPADDRGLVLLRPPASLQYRFARIAIEV
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgtctaatgcaaaagagagaaaacatgctaagaaaatgagaaaccagcccaccaatgtg
actttgttctctggctttgcggctaatagaggtggaaagcatcataatggaggtggaaaa
cctgcccaaactcaaaagcaagagtctcattctggaacttcacaacagcaggaaaccaaa
gtgacccaccattctctgtctgaccctgatgtgaatgagcagtcttcctccaaagtaatg
tttaggaaaaagggaggatggaaagcaggccctgagggcacgtcccaggagattcccaag
tatataactgcttctacttttgctcaggcccgagctgctgaaatcagtgctatgttaaaa
gcggtgacccagaagtcttctaattccatggttttccagacactgccacggcacatgagg
cgaagagccatgagccacaacgtcaaacgcctccctcgacgcttacgtgagatcgcccag
aaagaggcagagaaagcagtgcatcagaaaaaagaacattcaaaaaataaatgccataaa
gctcgaagatgtcacaaaaaccaggtgctggaatttaaccgtagacaaaagaagaacatg
tggttagaaactcatatctggcacgccaaacggtttcacatggtcaagaagtggggctac
tgcctcggggagaggccgacagtcaagagccaccgagcctgctatcgagccatgactaac
cgttgccttcttcaggatttatcctactactgttgtttggagttgaagggcaaagaagaa
gaaatactaaaggcactttctcaaatgtgtagcatagaaacaggattgacttttgctgca
gttcactgtttatctggaaagcgtcaaggtagtttgatgctttaccgggcaaatcaatac
cccagagaaatgcttgggcctgtcacattcatttggaagtcccagaggagccctggtgat
gcctcggagagcaggcagttgtggatctggctccatcccactgttaaacaggagatctta
gaggaaataaaagcagtgtgccagtgtatggaacctatcaaatcaactgtctgcactcct
gaccctcttctgacaccgccccaagaaaaaagccaaactgaactgcctgatgagaaaatt
ggcaagaaaagaaaacacaaagatggtggagaaaatgctataccagttaaaaaatttatt
ggggacgcaactagagatccacagcagccatgttcttgggtatcgccagccacaggcatt
gtaattagtgatttgacgatggagatgaacagataccggctgattggtccactctcccat
tccgtcctaactgaggcactaaaagctgcttctgtccacaccgatggcgaggatacagag
acgacacctcactgctggtggattgaaacctgtaggaatcctgataacgtttcccttcat
cacagacaagaagacttttttgaattgttgagaggaataacatcaccaggagaaattcca
gcaggtactattctgggactgacagttggggatcctcgaataaatttgcctcataagaga
tccaaagctttgcctgatccagaaaaatgccaagataatgagaaagctagacagctgctt
ctggagggtgtgcctgtggagtgtacacatagctttatctggaaccaagctatctgtaag
agtgtcacagagaataaaatctcggatcaggatttaaaccggatgagaagtgaattgctg
gtgcctgggtcacagcttgttttaggtccccaggaatccaagatacctatacttttgatt
caacaaccagggaaagtaactggtgaagaccgacggggatggggaagtggctgggatgtc
cttcttccaaagggctggggcatggctttctggattccatttatttatcgaggtgccaga
gttggagggttaaaagagggtttagtacattcacagtataaaaggtcacctaacatccca
ggtgatttcccagactgccctgctgggattcggtttgctgaagagcaagctaagaatctt
cttgaaaagtacaaaagacgccctcctgcaaaacggcccaactatgttaagcttggcact
ttggcccctttctgctgtccctgggtgcagttgactcaggactgggaatcaagagtacag
gcccaagaagaatcgtctgtagcttcatctccaagtggagaggagggtgacacaaggaga
cgtgaggtgccttgtgctgccacacctgaaaaaactcttaagctgtctgtaaacgaaccc
atagagccagaagaagcaatggacacagagtgtcaaggtcaggcagggaccaagcgggtc
ggagaccaggatgctgtcgagaacaatggtgctgccactggtcgtctctgcgttattagg
gagagaaaattactgaagcagctgtcagcctggtgtgggcccagctctgggggcagccgg
gcagcccgacgagcccctggcaggggtcagcaagacctgactcgagagacctatttgtct
gtcttgggccacttccccaggggcctggtatgggtcagcctgtccctgctccgcaagggc
agcccagagccacacaccatgatctgtgtcccagccaaggaggacctccttcgtcttagc
caggatcggctctactttgggccccaggaacccaaacacagtgacccatttaagagcaag
gtcctgaaacagaaagagaagaaaaagatggagaagagacagcgacgagggagtgctgct
cctgagggcctggcaggagaggatccaactgcagggcacgaagctttaacactgggcttg
tgggcaggccctctgccagccgtgacttcgcactgttccagggttctcctggggtttgtc
actcagggggatttttccatggcagttggctgtggagaagctctggggtttgttagtgtg
acaggcttgctggatatgctgtccaggcagccggcagatgacaggggcttggtgttactg
aggcctcctgcctccctgcagtatcggtttgcaagaattgctattgaggtgtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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