KEGG   Loxodonta africana (African savanna elephant): 100675845
Entry
100675845         CDS       T04351                                 
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
  KO
K07603  collagen type XVII alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:lav00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100675845 (COL17A1)
SSDB
Motif
Pfam: Collagen DUF2868 DUF2443
Other DBs
NCBI-GeneID: 100675845
NCBI-ProteinID: XP_023402521
Position
Unknown
AA seq 1501 aa
MEVTKKNKRDGTEVTERLITETVTTRLTSLPPKGGTSNGYTKTSSLGGGSRMEKQSLIHG
SSGYINSSGSTRGNSSTSSYRRAHSPASTLPNSPGSTFERKTHVTRHATYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASTSPTRNC
SNTLPIPKKGTVETKTVTASSQSVSGTYEATVLDASLPSHVWSSTLPAGSSMGAYHNNMT
TQSSSLLNTNAYSAGSVFGVPNNMASYSSTLHPGLSTCSSVFGMQNNLAPSSTTLSHGTA
TTSTAYSVKKNTPQNPAAVSTGVSTSAASTTIAQNDDLSPKDCKFLILEKDNVPAKKDIE
LLIMTKDSGKVFTASPASIATTSFSEDTLKKEKQATYTADTTLKSEANGDLKTASTKGKA
TYAEIQGYDRSGGGSGAGGKGPWGAAPTWYPCGSGCSWWKWLLGLLLTWLLLLGLLFGLI
ALAEEVRKLKARVDELEKIKTGVINFEKIESANKERLLGVTPGVGTDLGTGRLDGQSQEA
LWVFVKNKLMTEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPGPEGPKGQ
KGSVGEPGMEGPMGLRGREGPPGHRGDPGPPGFGEKGDRGPTGEPGPQGPPGVPGSVGPK
GSSGSPGPQGPPGAIGLQGLQGEVGLPGVKGDKGPMGPPGPKGDHGEKGSRGLTGEPGSR
GLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGIRGSPGPSGDPGKPGLTGPQGPQ
GLPGSPGQPGLKGEPGAPGKIVTAEGSSTVTVPGPPGPPGAMGPPGPAGSPGPAGPAGLP
GQQGPRGERGLAGESFLESSSSISEFLTTQGIDLRGPPGPPGPRGPPGPSIPGPPGPRGP
AGEGLPGPPGPPGSSETLFSGPPGPPGPPGPKGDHGPPGPRGHQGEQGPPGFSISDSGSL
GFSLQGPPGPQGPKGDKGDPGVPGAPGIPGGPSQGGSSGATYIPGPPGPPGPPGPPGSII
SSSGQEIRQYISEYMQSDSIRSYLSGVQGPPGPPGPPGPVTTITGETFDYSELASSVVSY
LQTSGYSIGTASASISSEDILAVLQRDDVRQYLQQYLMGPRGPPGPPGASGDVSLLSLDY
AELSSRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLRGSEFGGIVGPPGPPGPPG
IPGNVWSSISMEDLSSYLQTAGFTSIPGPPGPPGPPGPRGPPGVSEALATYATENTDSFR
SELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLLSGESSYSGGSSSSSGSSSFRPGTSH
SSSAAIGGASRGSLGEGDGGPYGTDFGLGGGYGAAAEGGMYGADGGSFGAGFAGGLDYNE
LAVRVSESLQRQGLLQGMAYTVQGPPGRPGPQGPPGISKVFSAYSNVTADLMDFFRIYGT
IPGPPGQKGEVGTPGPKGEMGPAGPPGRPGPPGPHGHKGEKGDKGDHVHAGRRRRSIATK
P
NT seq 4506 nt   +upstreamnt  +downstreamnt
atggaagtaaccaagaaaaacaaacgagatggcactgaagtcactgaaagacttatcact
gaaacagtaactacaagacttacatccttaccaccaaaaggggggaccagcaatggctat
actaagacgagctctcttggtggagggagccgaatggagaaacaaagcctgatacacggc
agcagtggctacataaactcaagtggaagcacaagaggcaattcctccacgtccagttac
aggagagctcattcacctgcctcaactctgcccaactcaccaggctcaacctttgaaagg
aaaactcacgtcacccgccatgcaacatacgaagggagctccagcggaaactcttctccc
gagtaccctcggaaggaatttgcatcttcttcaaccagaggacggagccaaacacgagag
agcgaaatccgagttcgactgcagagtgcgtccccatctacacgatggacagaattggat
gatgttaagcgtttgctcaaggggagccgatcagcaagcacgagccccacacgaaactgc
tccaacacactccccatccccaagaagggcactgtggagaccaaaacagtgacagcaagc
tcccaatcagtgtcgggcacctacgaagcaacagtcctggatgccagccttccctctcat
gtgtggtcctccaccttgcctgcggggtcctccatgggagcctatcacaacaacatgaca
acccagagctcatcgctcctcaacaccaatgcctattctgcaggatcggtctttggagtt
ccaaataacatggcgtcttactcttccacgctccaccccggactcagcacctgctcctca
gtgttcggcatgcagaacaatctggcccccagctcaaccaccctgtcccatggcacagcc
accacttccacagcatatagtgtgaagaaaaacacaccccagaaccctgctgctgtgagc
accggagtgtccacatctgctgccagcacaacaattgcccagaatgatgacctttcgccc
aaggactgtaagttcctgatcctggagaaagacaacgtgcccgccaagaaggatatagag
ctgctgatcatgaccaaagacagcgggaaggtcttcactgcctccccagcaagcatcgct
acgacttctttttcagaggataccctaaaaaaggaaaagcaagccacctacactgctgac
accaccctgaagtctgaagctaatggagacctgaagacagcatccaccaagggcaaggcc
acctatgcagaaatccagggctatgaccgcagtggtggaggcagtggtgctggtggcaaa
ggcccctggggggcagcgccaacctggtacccctgtggctccggctgcagctggtggaag
tggctgctgggcctgctgctcacctggctgctcctcctggggctgctcttcggcctcatc
gctctggcggaggaggtgagaaaactgaaagcgcgagtggatgaactggagaaaatcaag
accggtgtgataaattttgagaagatagagagcgccaacaaggaacgtctcctgggtgtc
acacccggggtgggaacggacctgggcacaggcaggctggacggccaaagtcaggaggca
ctctgggtattcgtgaagaacaagctaatgactgaacaagaaaatgggaatctccgagga
agccctggccctaaaggtgacatgggaagtcaaggccctaaaggtgatcgaggactccct
gggactccaggtatccctgggctcttgggccatccaggtccagaaggaccaaagggacaa
aaaggcagcgtgggagagcctggcatggagggaccaatgggcctgagagggcgagaaggt
cccccaggacaccgcggtgacccagggcctcctgggtttggtgagaaaggagacagaggg
cctactggtgagccaggacctcagggcccacctggtgtcccaggttctgtgggccccaaa
ggttccagtggttctcctggcccacagggccccccaggtgctataggcctccaagggctc
caaggtgaagtgggactccctggtgtcaaaggtgataaaggacctatgggaccgccagga
cccaaaggtgaccatggcgagaaaggatcccgaggcctcacaggcgagcctggctcgaga
ggtttgcctggtgctgtgggtgagcctggggctaaaggagcaatgggtcccgctggccct
gacggacaacaaggcccaagaggtgaacaaggtctcacagggatgcctggaatccgtggc
tcaccaggaccttctggagacccaggaaagccaggtctcacgggaccccaaggacctcag
ggacttcctggtagccccggccaaccagggcttaaaggtgaaccgggagctccaggcaag
atcgtgactgcagaggggtcatcgactgtcactgtcccaggccccccgggacctcctgga
gctatgggacccccaggacctgcaggctccccaggtcctgccggccctgctggtctccca
ggacagcaaggcccacgaggggagcgagggcttgctggtgaatcgtttctggagagcagc
agctccatctctgagttcctcactacacaaggtattgatttacgaggtcccccaggtcca
cctgggccacgtggtccaccaggaccttctattccaggccctccaggaccccgaggccca
gcaggggaaggattgccaggcccaccaggcccgccaggatcttcagaaaccttattctct
gggcccccaggcccacctggccccccaggccccaagggagaccatgggcccccaggtcct
cgaggacaccaaggcgagcaaggccccccagggttctcaatatcagattccggttctctt
ggattcagcctgcagggacccccaggccctcaggggcccaagggtgacaaaggtgatcct
ggtgttccaggggctcctggcattcctggcggtccctctcaagggggatcgtccggtgcc
acgtacataccaggcccaccaggcccgccggggcctcctgggccaccaggctccatcatc
agcagctctggccaggagattcggcagtacatctccgagtacatgcagagtgacagtatt
aggtcttacctatctggagttcagggtcccccaggcccacctggtcccccagggcctgtc
accaccatcacaggagagacctttgactactcagagctggcaagcagtgtcgtgagctac
ttacagacctcagggtacagcattggtacagcctccgcctccatctcctctgaagacatc
ctggctgttctacagcgggatgatgtacgtcagtatctacagcagtacctgatgggccct
cgggggccaccagggccaccaggggccagtggagatgtgtccctcctgtctctggactac
gcagagctgagtagccgcattctcagctacatgtcaagttctgggatcagcattgggctt
cctggccccccgggcccccctggcttgccgggaacatcctatgaggagctgctctccttg
ctgcgaggatctgaatttggaggcattgttggacccccaggccccccagggccaccaggg
atcccaggcaacgtgtggtccagcatcagcatggaggacctctcatcttacttgcagacg
gccggcttcacatccatcccaggccctccaggccctcctggtcccccaggtcctcgaggg
cccccgggtgtctcagaagctctggcgacctatgcaactgaaaacactgacagcttccgg
agtgaactgattagctacctcacaagtcctgacgtgcggagcttcattgtcggcccccca
ggccctccaggacctcagggaccacctggagacagccgcctcctgtcaggggaaagctcc
tacagtgggggtagcagctcctcctcaggaagctcatcgttccgaccgggtacctcccac
agctcttcagctgccataggaggagccagcaggggctccctgggcgaaggagacggaggc
ccctatggcactgacttcggcctgggcggaggctatggggcagcagcagaaggtggcatg
tatggtgctgatggtggatcattcggggctggctttgccggaggcctggattataatgag
ctggctgttcgggtgtcggagagcctgcagcgtcagggtctgcttcaagggatggcctac
actgtgcagggcccaccaggccggccaggccctcaggggccccccggaatcagcaaggtc
ttctctgcctacagcaatgtgactgcggatctcatggacttcttccgaatttatggcacc
attccaggaccccctggacagaagggagaggtgggcaccccaggacccaaaggtgagatg
ggccctgcgggaccaccaggacggcctggcccacctggccctcatgggcacaagggagaa
aaaggagacaaaggtgaccacgtccacgctgggcggagaaggcgaagtattgccaccaag
ccatga

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