KEGG   Loxodonta africana (African savanna elephant): 100676039
Entry
100676039         CDS       T04351                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03013  Nucleocytoplasmic transport
lav05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100676039 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100676039 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100676039 (NDC1)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100676039 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 100676039
NCBI-ProteinID: XP_003411118
UniProt: G3SRF8
Position
Unknown
AA seq 817 aa
MPKGTSGRRRLPAFCTWELRVPECSAPPTRSQRANETTVPSMQRRPLFLAPRWALLRRDL
LNPRRPVLKSKPHLGDVSVERFWPVEPVQKKPRRDGLGPGPGFAQAAFETAPSGPSWGLP
PFEPRWRAGALSPALRRVGAAISMATAASRPCAGGSRDILWRVLGWRIVASIFWSVLLLP
ICTTVFIIFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVIVIINIFNVEFYTVVPC
IPCSRLALIGKIVHPQQVMHSFVHASMGMVMAWCAALITKGQYSFLVVPCTGTESSDSPA
AQTCLNEYHLFFLLAGAFMGYTYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSC
VESLFLVRNFCILYYFLGHIPKAWISTAMDLRKDKQLHPLDTVSGLLNLSLLYHVWLCGV
FLLTTWYISWILFKIYATEAHLFPVQPSFAEESDECLPKVLNSNPPLIIKYLALQDLMLL
SQYSPSRRQEVFSLSQPGGHPHNWTAISRECLSLLNDMTQKLILYQEAAATNGRVIPSSY
PMEPKKLNSPEEATFQTPKSGQMTRPSVPLLVKASLFSPKLSTPDVASPLGTPFGSSVMN
RMAGIFDVNTCCGSPQSPQLVRRGPRLWTSASDQQMTEFSNPSLSTSVNAEAKTVGQPSI
IYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFT
EDRFGVVQTTLPAIINSLLTLQEAVDKYFKLPHVSSKPPRISGSLVDTSYKTLRFAFRAS
LKTAIYRITTTFGEHLNAVQTSAEHQKRLQQFLEFKE
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgccaaaaggcacctcgggaagacgtcgactcccagcattctgtacttgggaactccgt
gtcccagaatgcagcgctcctccaactcgttctcagagggccaacgagactacagttccc
agcatgcagcgccgccccctgtttctggcgccccgctgggccctgcttcggagagacctt
ctaaatcccagaaggccggtcctgaagtcaaagccccatctcggggatgtatctgtagaa
cggttctggcccgttgagcctgtccagaagaagcctcggagggatgggttggggcctggg
ccgggcttcgcgcaggcagcgtttgagacagccccatcggggccctcctggggcctacct
ccctttgaaccgcggtggcgggcgggcgctctgtctcctgcactccgtagggtaggggcc
gccatctccatggccacggccgcgagtcggccttgtgccggcgggtcgcgggacatcctg
tggcgcgttttaggctggaggatagttgcaagtattttttggtcagtgctgcttctaccc
atttgtaccacagtatttataatctttagcagtattgatttatttcatcctatacagtgg
ctgtcagattctttcaatgatctatatagttcatatgtaatcttttacctcctccttctg
tcagtggtaatagtgataataaatattttcaatgtggagttttatacagttgtgccttgc
attccctgctccagactggcgctgatagggaagattgttcatcctcagcaggtcatgcac
tcatttgttcatgcttctatgggaatggtgatggcttggtgtgctgcattgataaccaag
ggccagtacagttttcttgtggttccctgcacaggtaccgagagctcagatagccctgct
gcacagacctgcttaaatgaatatcacctttttttcctactggctggagcattcatgggc
tatacctatagccttctgtattttgtcaacaatatgaattatcttccctttcccattata
cagcaatacaaattcttacgctttaggaggtctctgctcttactagttaaacatagttgc
gtggaatcgctattcctggttagaaatttctgcatcttgtattattttctgggccatatt
cccaaagcttggattagcactgctatggaccttcggaaagataagcagttacatcctctt
gacactgtgagtggtctcttgaatctctcattgctctaccatgtctggttgtgtggtgtc
tttcttctaacaacttggtacatctcatggatactcttcaaaatctatgctacagaggct
catctgttccctgttcaaccatcatttgctgaagagtcagatgaatgcctccctaaagtt
ttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcagtattctccttcacgaagacaagaagtttttagtcttagccaaccaggtggacat
ccccacaattggacagccatttcaagggagtgtttgagtcttttaaatgatatgactcag
aaattgattctctaccaagaagctgctgctactaatgggagagtgataccttcatcatac
ccaatggaacctaagaaattgaactctccagaagaagctacttttcagacgccaaaatct
ggccagatgactcggccttcagtgccactgttagttaaagcgtcactgttttctccaaaa
ttatctacacctgatgttgcaagtccccttgggaccccttttggctctagtgtaatgaac
cggatggctggaatttttgatgtaaacacctgctgtgggtcacctcaaagtcctcaacta
gtaagaagagggccaagattatggacttctgcctctgatcagcaaatgactgaattttct
aatccatctctatctacctctgttaatgctgaggctaagacagtgggacagcccagtata
atttattcatggatacagaataaacgtgaacagattaagaacttcttgtcaaaacgggtg
ctgataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcagat
gcccaaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcatttaca
gaagatagatttggagttgtccagactacactaccggctattattaatagtttgctgaca
ctgcaagaggcagttgacaagtacttcaagcttcctcatgtttccagtaaaccacctcga
atttcaggaagccttgtggacacttcttacaaaaccttaagatttgcatttagagcgtca
ctaaaaactgccatctatcgaataacgactacttttggtgaacatctgaatgctgtgcaa
acatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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