KEGG   Leclercia adecarboxylata: APT61_15830
Entry
APT61_15830       CDS       T04232                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lax  Leclercia adecarboxylata
Pathway
lax03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    APT61_15830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lax03400]
    APT61_15830
DNA repair and recombination proteins [BR:lax03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     APT61_15830
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      APT61_15830
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD SBDS_domain_II UB2H AAA_30 Helicase_C_2 AAA_22 DUF87
Other DBs
NCBI-ProteinID: ALZ97406
UniProt: A0A7H0F7N3
Position
complement(3395693..3397708)
AA seq 671 aa
MSKPFKLNSAFRPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDFALRVELFDEEVERLSLFDPLTGQVESIIQR
FTVYPKTHYVTPRERIVQAMEDIKVELADRRKTLLDNNKLLEEQRISQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRSPVEADTVALTPKALQQKIHELEAQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgagtaaaccgttcaaactgaattccgctttccgtccttccggcgatcagcctgaagcg
attcgccgtctgaaagaggggctggaggatgggcttgcacaccagacgctgctgggcgta
accggttcgggtaaaacctttaccgtcgccaacgtgatcgccgatctgcagcggccgacc
atggtgctggcaccaaataaaacgctggctgcgcagctgtacggcgagatgaaagagttc
ttccccgaaaatgcggtggagtatttcgtctcgtactacgactactatcagccggaagcc
tacgtccctagctccgatacctttatcgaaaaagatgcctcggtgaacgagcatatcgag
cagatgcgtctgtccgcgaccaaggcgctgcttgaacgccgtgacgtagtggtggtggca
tcggtatcagccatttacggcctcggcgatcccgatctctacctgaagatgatgctgcac
ctgacccaggggatgattatcgatcagcgcgccattttgcggcggctggcggaactgcag
tacacccgtaacgatcaggcgttccagcgtggcaccttccgcgttcgcggggaggtcatc
gatatcttcccggctgagtcggacgacttcgcgctgcgtgtcgagctgttcgatgaagag
gttgagcgtctgtcgctgtttgacccgctgaccggccaggtggagtcaattattcagcgc
ttcaccgtctacccgaaaacccactacgtgaccccgcgcgagcgcatcgtgcaggcgatg
gaagatatcaaagtcgagttggcggatcgccgcaaaacgctgctggacaataacaagctg
ctggaagagcaacgtatcagccagcgtacccagttcgatctcgagatgatgaacgagctg
ggctactgctccgggattgaaaactattcgcgctatctctctggccgcgggccgggggag
gcaccgccaaccctgtttgactacctgccagcggatggcctgctggtggtggacgaatcc
cacgtcaccattccgcagattggcgggatgtatcgcggcgaccgggcgcgtaaagagacc
ctggtggagtacggcttccgcctgccgtcagcgctggataaccgcccaatgaagtttgaa
gagtttgaggcgctggcgccgcaaaccatctacgtctccgcaacgccgggcaactacgag
ctggagaaatcgggcgacgaagtggtcgatcaggtggtgcgtccgacaggcctgctggat
ccgattatcgaagtgcgcccggtcgcgacgcaggtggatgacctgctgtcggagatccgc
gcccggtcggccatcaacgagcgcgtgcttgtcaccaccctgaccaaacgcatggccgag
gatctgaccgaatacctcgaggagcacggcgagaaggtgcgctatctgcactccgatatc
gacaccgtggagcgaatggagatcatccgcgatctgcgtcttggcgagttcgacgtgctg
gtggggatcaacttgctgcgtgaagggctggatatgccggaagtgtcgctggtggcgatt
ctggatgccgataaagagggcttcctgcgctctgagcgctcgcttatccagaccattgga
cgcgccgcgcgtaacgtcaacggcaaagcgattctctacggcgataaaatcaccccctca
atggcaaaagcgattggggaaaccgaacgccgtcgcgagaagcagcaggcctacaacgaa
gagcacggcattacgccgcagggtctgaacaagaaggtggtggatatcctggcgctcggc
cagaacatcgccaaaaccaaagcgaaaggtcgcggcaagtcacgctcaccggtggaggct
gataccgttgccctgacgccgaaggcgctgcagcagaaaatccacgaactggaagcacag
atgatgcagcatgcgcagaatctggagttcgaggaggccgcgcagatccgcgaccagctg
caccagctgcgggatctgtttatcgccgcgtcctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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