KEGG   Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_0015
Entry
LBF_0015          CDS       T00712                                 
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
lbf  Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03030  DNA replication
lbf03430  Mismatch repair
lbf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LBF_0015 (holA)
   03430 Mismatch repair
    LBF_0015 (holA)
   03440 Homologous recombination
    LBF_0015 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbf03032]
    LBF_0015 (holA)
   03400 DNA repair and recombination proteins [BR:lbf03400]
    LBF_0015 (holA)
Enzymes [BR:lbf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LBF_0015 (holA)
DNA replication proteins [BR:lbf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LBF_0015 (holA)
DNA repair and recombination proteins [BR:lbf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LBF_0015 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta Mt_ATP-synt_D TraK_2 DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: ABZ92562
Position
I:complement(17521..18630)
AA seq 369 aa
METKKSQAKEYNSLFQLFKTPPAQIPQFFAYAGEDSYEFELIVEHYREILQKTLGDFEVI
LIVSESGEQAKLFAELFTPDMFYPRKLIIIKNATALFKPILDPKAAHEWKDFASGFRKNI
TSVSDEIFTLIHYDGKDVPKSLIDLFQGTLSYFKTKVLYPNDYPKIFKEVCDQEQAHFEP
NATEEFIHRTPANVGAYIKSVKKLKQYLHKSKFTLEDVNSVLFSQNELNTNVLVESLVQK
RKVDFFKEFTKFGDQNSEILNFLTRLTYKLDEIRKIKVIRSRHNGEVPIPIMDELLKTGS
FSEARKNFVRRQLVSDSANFTDKVLDLFYDQVIEMNIKFKSGLRDEEGKNYFIQKIMHLF
SLLQDKSSK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggaaacaaaaaaatcacaagccaaggaatataactcccttttccaactttttaaaacg
cccccggcccaaatcccacaattttttgcctatgcgggtgaggattcctacgaatttgaa
ctgatcgtcgaacattatagagaaatccttcaaaagacattaggtgattttgaagtcatt
ttgatagtctccgaatcgggagaacaggccaaattgttcgctgaacttttcactcccgat
atgttctacccaagaaaactcatcatcattaaaaatgcgactgctttgttcaaaccaatt
ctcgatcctaaagccgcccatgagtggaaagattttgcttctggatttcgaaagaatatc
acttccgtttccgatgaaatattcactctcatccattatgatgggaaagatgttccaaaa
agtttaatcgatttattccaaggaacgcttagttattttaaaaccaaagtactatatcca
aatgattatccgaaaattttcaaagaagtctgtgaccaagaacaagcacattttgaacca
aatgctacagaggaatttatccatcggactccggcaaatgttggtgcttacatcaaaagt
gttaagaaattaaaacagtatttacacaaatccaaattcacattggaggatgtaaattcc
gtcttgttcagccaaaatgaactgaataccaatgtacttgtcgaatctcttgtccaaaaa
cggaaagttgattttttcaaagagtttacgaaattcggagatcaaaattctgaaattctc
aattttttaacaaggcttacttataaactagatgaaattcgtaaaatcaaagtcatacga
tctaggcataacggagaagttcccattccgattatggacgaacttcttaaaacaggaagt
ttttctgaagcacggaaaaattttgtgagacgccaattggtatctgattctgcgaatttc
accgataaggtattagatttattttatgaccaagtgatcgagatgaatattaaattcaaa
tcagggcttcgagatgaagaaggcaaaaactatttcatccaaaaaatcatgcatttattt
tctctccttcaagataagtcttccaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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