KEGG   Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1433
Entry
LBUCD034_1433     CDS       T02244                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lbn  Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03030  DNA replication
lbn03430  Mismatch repair
lbn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LBUCD034_1433 (dnaQ)
   03430 Mismatch repair
    LBUCD034_1433 (dnaQ)
   03440 Homologous recombination
    LBUCD034_1433 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbn03032]
    LBUCD034_1433 (dnaQ)
   03400 DNA repair and recombination proteins [BR:lbn03400]
    LBUCD034_1433 (dnaQ)
Enzymes [BR:lbn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LBUCD034_1433 (dnaQ)
DNA replication proteins [BR:lbn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LBUCD034_1433 (dnaQ)
DNA repair and recombination proteins [BR:lbn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LBUCD034_1433 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DEDDh_C RNase_H_2 MCLN_ECD DNApol_Exo
Other DBs
NCBI-ProteinID: AFS00463
UniProt: J9W1S7
Position
1422383..1422916
AA seq 177 aa
MNFVAMDFETANAKRASACSIALAIVRDNQITNEFYSLINPEMDFSWRNINVHGIHERDV
VDAPTFPEVWRHIQPLFSANKLVIAHNASFDNSVLKRTLERYEVQPPHYLTLDTLRTSKQ
FYPTLENHKLNTLCDKLNIVLEHHHNALDDSVACANILLTEQAQFGSDMLRPFVKAI
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaattttgttgcgatggatttcgaaaccgcaaacgcaaaaagagccagcgcatgttca
attgcactggccatcgttcgagataatcaaatcactaacgaattttattcattaatcaat
ccggaaatggactttagttggcgaaatatcaacgtccatggcattcatgaacgtgatgtt
gtcgatgccccgacctttccggaagtttggcgccacattcaaccgctgttttcagccaat
aaattggtgattgcccacaacgcatcatttgataacagcgtcttgaaacgaacactggaa
cgttatgaagttcaaccgccgcactatctgacactggacacgttaaggacctccaagcaa
ttctacccgacgttggaaaatcacaaacttaacaccctttgcgataagctcaacatcgtt
ttggaacatcaccataacgcgctggacgatagtgttgcctgtgccaatattctattaacc
gaacaggcccaatttggcagcgatatgctccggccatttgtcaaagcaatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system