KEGG T04848: LBWT

Leptolyngbya boryana: LBWT_27610

Entry

LBWT_27610        CDS       T04848

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

lbo Leptolyngbya boryana

Brite

KEGG Orthology (KO) [BR:lbo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lbo03009]
    LBWT_27610
   03016 Transfer RNA biogenesis [BR:lbo03016]
    LBWT_27610
Enzymes [BR:lbo01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     LBWT_27610
    5.4.99.29  23S rRNA pseudouridine746 synthase
     LBWT_27610
Ribosome biogenesis [BR:lbo03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LBWT_27610
Transfer RNA biogenesis [BR:lbo03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    LBWT_27610

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

BAS56834

Position

complement(2948019..2949512)

AA seq 497 aa
MRSQLDPDGVTYWYEGICPNSNTLLRLPRTKFVEAIARQLMQNLSACEGKMYGVLLAQSA
SGEQHILKAFSGLLNGRSVVEGWVPPIPGRDRVQLEEARTLTQLNSIQQQLIQLSCIPER
QQYKILETEYKQKLEQLSILHHQRKLERQQQRQNQDLAFELDEQSKRDGIEKRNLKRDRD
SHLIPLKQIIDQADEQIRQLKQKRKRLSQQLQAQMHASYRVTNFAGETRSLSELLTSMPT
GTGECCAPKLLHYAATHDLKPIAMAEFWWGEPMGDKIPGQFYGACVERCQPMLGFLLAGT
SSIETVYQDDHLVVVNKPAGLLSVRGRYGQDCILDRFSEPLIPVHRLDQDTSGLLILARD
SHSYKRLSQQFEQRQIHKVYTAVLEKEIAELEGQIDLPLWSDPSDRPKQKVNYQFGKPCL
TYFRVLSSCQVEFRPITGRTHQLRVHADQGLGSAIVGDRLYGNPQGDQRLHLHARDIRFT
HPITGETIDLTTKTPFF

NT seq 1494 nt +upstreamnt +downstreamnt
atgcgatcgcagcttgatcctgatggagttacctattggtatgagggaatttgtccaaac
tcaaatactctcctacgactaccacgcacaaaatttgtcgaagcgattgcgcgtcaattg
atgcaaaatctttcagcttgcgaaggtaagatgtacggcgttttactagctcagtctgct
tctggagagcaacacattctcaaagctttttctggcttactaaatggacggagcgttgtt
gaagggtgggttccgccgattccgggtcgcgatcgcgtgcaactcgaagaagctagaact
ttaacccaactcaactcgattcagcagcaattaattcaactctcttgtatccctgagcgt
cagcagtacaaaattctagagacagaatacaagcagaaacttgaacaactctcaatcctt
catcaccaacgaaaactcgaacgccaacagcagcgacaaaatcaagatctggcttttgaa
ttagatgaacaaagcaaacgcgatggcattgagaaacgcaatctaaaacgcgatcgcgat
tcacatctcattccactcaaacaaatcattgatcaagctgatgaacagattcgtcagctt
aaacaaaaacgtaagcgactctcgcagcaacttcaagcacagatgcacgctagctatcga
gtgacaaattttgctggagaaacgcgatcgctcagcgagcttctcacctcaatgcccacg
ggaaccggagagtgctgtgcgcctaagcttctacattacgctgcaactcatgatttaaag
ccgattgcaatggctgagttttggtggggtgaaccgatgggagacaaaattccaggacaa
ttctatggagcctgcgtggagcgttgccagccaatgctcggatttctgcttgctggcaca
agttcgattgagacagtctatcaggatgatcacctcgttgtcgtcaataaacctgccggg
ttgctttccgtccgagggcgatatgggcaggattgtattctcgatcgcttctctgaaccg
ctcatccccgtacatcgattagatcaagacacgtctggcttactgattctggcgcgcgat
tcacacagctacaaacgcttaagccagcaatttgaacagcgccaaattcataaagtctac
acagcggtcttagaaaaagaaattgctgagttagaaggtcagatcgatctgcctttatgg
agtgaccccagcgatcgtccaaaacagaaggtcaattatcagtttggtaaaccctgtttg
acctattttcgcgtcctgagttcatgccaagttgaatttcgaccgattactggcagaacg
catcaactccgggttcatgcagatcaaggattaggatcagcgatcgtcggcgatcgactg
tatgggaatccacaaggagatcaacgcttacatctgcacgcacgagatattcgattcacc
catccgatcacaggcgaaacgatcgacttgacaacaaaaacgccttttttttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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