KEGG   Lactobacillus brevis ATCC 367: LVIS_1041Help
Entry
LVIS_1041         CDS       T00406                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lbr  Lactobacillus brevis ATCC 367
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lbr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LVIS_1041
Enzymes [BR:lbr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LVIS_1041
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LVIS_1041
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1052788..1053648)
Genome map
AA seq 286 aa AA seqDB search
MPELPEVETVRRGLTRLVQGATIAHVEVRYPKMVTPDADVFTAELISRKIERIDRRGKYL
LFRFSGDLTMVSHLRMEGKYDVQPEGSPVSKHTHVIFHLTDNRELRYTDTRKFGRMQLVP
TGEETTLAPSLGKLGPEPTAETLTLAYMVKIFGKSHKVVKPFLLDQTRIAGLGNIYADEV
LWLSKINPLTPVDTLTPSQLSELRQNIIDEMALAIGGHGTTVHSFSTAFGEAGQFQNQLH
VYGREGEPCERCGTELVKIKVAQRGTHFCPHCQPLPPEAKAALIHD
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattacctgaagttgaaacggttcgacgcgggttgacgcgattggttcaaggg
gccactattgctcacgttgaggttcgttatccaaaaatggtcacacctgacgcggatgtc
tttaccgcggaattaatcagccggaaaattgagcggattgatcggcgaggaaaatacctg
ttattccgatttagtggtgacttaacgatggtgtcacacttgcgtatggaaggaaagtat
gacgtccagccagaaggtagccccgtttccaagcatacgcatgtgatctttcatttaact
gataatcgggagttgcgttataccgatacccggaagtttggccgaatgcaattagtgccg
acgggcgaagaaacaacgctggccccctcattgggcaaattgggaccggaaccaacggcg
gagaccttaacgttagcgtatatggtcaaaatctttggtaagtcacataaagtggtgaag
cctttcttattagatcagacgcgaattgctggattggggaatatctatgcagacgaggtc
ctgtggttatctaagattaatccactaacgccagtagatacgttaacgccgtctcaattg
tcggagctacgccaaaatattattgatgagatggctttagccattggggggcatggcacg
acagtccattcattttcgacagcgtttggtgaggctggtcagtttcaaaatcagttgcat
gtctatggccgagaaggtgaaccgtgcgaacggtgtggaacagaattggttaagattaag
gtggcccagcgtggcacgcatttctgcccgcactgccagccattaccaccagaagcaaag
gcggcgttgattcatgactga

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